RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
HIF3A-203ENST00000291300 CHST13Q8NET6 341 aa18.43■□□□□ 0.54
HIF3A-203ENST00000291300 CRACR2AQ9BSW2 395 aa18.43■□□□□ 0.54
HIF3A-203ENST00000291300 MOV10L1Q9BXT6 1211 aaKnown RBP18.43■□□□□ 0.54
HIF3A-203ENST00000291300 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
HIF3A-203ENST00000291300 TYW1Q9NV66 732 aaKnown RBP18.43■□□□□ 0.54
HIF3A-203ENST00000291300 REXO2Q9Y3B8 237 aaKnown RBP18.43■□□□□ 0.54
HIF3A-203ENST00000291300 SOWAHBA6NEL2 793 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 PDXKO00764 312 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 KIF20AO95235 890 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 LYPLA2O95372 231 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 NR3C1P04150 777 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 MARSP56192 900 aaKnown RBP18.42■□□□□ 0.54
HIF3A-203ENST00000291300 KRT76Q01546 638 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 PPIL2Q13356 520 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 MAP1SQ66K74 1059 aaPredicted RBP18.42■□□□□ 0.54
HIF3A-203ENST00000291300 ANO5Q75V66 913 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 FAM178BQ8IXR5 827 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 ZNF526Q8TF50 670 aaPredicted RBP18.42■□□□□ 0.54
HIF3A-203ENST00000291300 DBR1Q9UK59 544 aaKnown RBP18.42■□□□□ 0.54
HIF3A-203ENST00000291300 ODF2LQ9ULJ1 636 aa18.42■□□□□ 0.54
HIF3A-203ENST00000291300 CXCL11O14625 94 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 CETN3O15182 167 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 STBD1O95210 358 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 PSMC5P62195 406 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 ETF1P62495 437 aaKnown RBP18.41■□□□□ 0.54
HIF3A-203ENST00000291300 GPAT2Q6NUI2 795 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 CYP26C1Q6V0L0 522 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 TMTC1Q8IUR5 882 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 C4orf19Q8IY42 314 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 WDR24Q96S15 920 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 ZNF408Q9H9D4 720 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 LZTFL1Q9NQ48 299 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 KCND2Q9NZV8 630 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 RBPJLQ9UBG7 517 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 GABBR1Q9UBS5 961 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 DNAI1Q9UI46 699 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 TFR2Q9UP52 801 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 AGTPBP1Q9UPW5 1226 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 SCN4AP35499 1836 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 SPATA31C2B4DYI2 1134 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 JAK3P52333 1124 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 SOX10P56693 466 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 STRA6Q9BX79 667 aa18.41■□□□□ 0.54
HIF3A-203ENST00000291300 TISP43B9A030 160 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 EIF3DO15371 548 aaKnown RBP eCLIP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 PPP1R37O75864 691 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 NOL4O94818 638 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 PLEKP08567 350 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 CCDC175P0C221 793 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 ALDH5A1P51649 535 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 ZBED6P86452 979 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 ZNF746Q6NUN9 644 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 KIF18AQ8NI77 898 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 NUP58Q9BVL2 599 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 PAXBP1Q9Y5B6 917 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 PCDHA10Q9Y5I2 948 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 CCP110O43303 1012 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 CALUO43852 315 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 PGK2P07205 417 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 SFNP31947 248 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 MEA1Q16626 185 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 XKR9Q5GH70 373 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 FIGNQ5HY92 759 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 LDLRAD1Q5T700 205 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 SWSAP1Q6NVH7 229 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 CCDC60Q8IWA6 550 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 SENP7Q9BQF6 1050 aa18.4■□□□□ 0.54
HIF3A-203ENST00000291300 JPH1Q9HDC5 661 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-203ENST00000291300 GNA14O95837 355 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 ACTR2P61160 394 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 NAA30Q147X3 362 aaPredicted RBP18.39■□□□□ 0.53
HIF3A-203ENST00000291300 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 BAP1Q92560 729 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 TCEAL9Q9UHQ7 104 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
HIF3A-203ENST00000291300 A0A1W2PQJ5 194 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 MAFGO15525 162 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 GTF2F1P35269 517 aaKnown RBP eCLIP18.38■□□□□ 0.53
HIF3A-203ENST00000291300 STXBP2Q15833 593 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 CYFIP1Q7L576 1253 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 FGD4Q96M96 766 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 SEL1LQ9UBV2 794 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 SLC9A2Q9UBY0 812 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 TRIM10Q9UDY6 481 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 PCDHB13Q9Y5F0 798 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 EPN1Q9Y6I3 576 aaPredicted RBP18.38■□□□□ 0.53
HIF3A-203ENST00000291300 K7ENM7 598 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 ARHGAP25P42331 645 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 MKRN3Q13064 507 aaKnown RBP18.38■□□□□ 0.53
HIF3A-203ENST00000291300 EEPD1Q7L9B9 569 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 LRRN4CLQ8ND94 238 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 DNERQ8NFT8 737 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 BORCS6Q96GS4 357 aa18.38■□□□□ 0.53
HIF3A-203ENST00000291300 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms