RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 A0A1B0GTH6 734 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 PSMD14O00487 310 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 ATP2A1O14983 1001 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 SOX10P56693 466 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 ERVK-24P63145 666 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 LACTBP83111 547 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 CIAPIN1Q6FI81 312 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 RCSD1Q6JBY9 416 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 DEFB132Q7Z7B7 95 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 CCDC13Q8IYE1 715 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 DCPSQ96C86 337 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 LBHD1Q9BQE6 289 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 GABBR1Q9UBS5 961 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 LIMA1Q9UHB6 759 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 GGT7Q9UJ14 662 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 SNX24Q9Y343 169 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 MYH10P35580 1976 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 MXI1P50539 228 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 TNFAIP1Q13829 316 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 DRAP1Q14919 205 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 DALRD3Q5D0E6 543 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 RBM43Q6ZSC3 357 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 C16orf86Q6ZW13 317 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 RSAD2Q8WXG1 361 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NSRP1Q9H0G5 558 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 FAM49AQ9H0Q0 323 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 NOVA2Q9UNW9 492 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 HIP1RO75146 1068 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 MAN1A1P33908 653 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NSFP46459 744 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 PPFIA1Q13136 1202 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NNTQ13423 1086 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 KNOP1Q1ED39 458 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 SLC27A3Q5K4L6 730 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 C10orf76Q5T2E6 689 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 MCF2L2Q86YR7 1114 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 OR2W6PQ8NHA6 318 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 HSPH1Q92598 858 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 PRMT6Q96LA8 375 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 ACCSQ96QU6 501 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 RIC8AQ9NPQ8 531 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 TXNDC16Q9P2K2 825 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NEURL4Q96JN8 1562 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 FAM208AQ9UK61 1670 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 PDE4DIPQ5VU43 2346 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 MYH13Q9UKX3 1938 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 EIF4E1BA6NMX2 242 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 KRT81Q14533 505 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 EZH2Q15910 746 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 SGO2Q562F6 1265 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 BTBD6Q96KE9 485 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NT5C1BQ96P26 610 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NUDT12Q9BQG2 462 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 MED10Q9BTT4 135 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 BAIAP2L1Q9UHR4 511 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 EMSYQ7Z589 1322 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 DDTLA6NHG4 134 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 GYS1P13807 737 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 ACOT2P49753 483 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 ERFP50548 548 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 LRRC63Q05C16 580 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 SEC23AQ15436 765 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 FAM133BQ5BKY9 247 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 DDX42Q86XP3 938 aaKnown RBP eCLIP5.18□□□□□ -1.58
UBR1-201ENST00000290650 PPP1R13LQ8WUF5 828 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 LRRC45Q96CN5 670 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NUCKS1Q9H1E3 243 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 RPAP3Q9H6T3 665 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 GPRC5CQ9NQ84 441 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 TUBE1Q9UJT0 475 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 ADAM21Q9UKJ8 722 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NOD1Q9Y239 953 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NALCNQ8IZF0 1738 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 SLIT1O75093 1534 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 DENND3A2RUS2 1198 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 STAM2O75886 525 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 GCFC2P16383 781 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 PRELPP51888 382 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 SESN3P58005 492 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 NCAPHQ15003 741 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 LDHDQ86WU2 507 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 COL23A1Q86Y22 540 aaPredicted RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 ADSSL1Q8N142 457 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 VGLL2Q8N8G2 317 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 TMEM143Q96AN5 459 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 CALN1Q9BXU9 219 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 PACSIN1Q9BY11 444 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 METTL14Q9HCE5 456 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 DDX4Q9NQI0 724 aaKnown RBP5.18□□□□□ -1.58
UBR1-201ENST00000290650 AMACRQ9UHK6 382 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 PLAAQ9Y263 795 aa5.18□□□□□ -1.58
UBR1-201ENST00000290650 TADA3O75528 432 aa5.17□□□□□ -1.58
UBR1-201ENST00000290650 CCND2P30279 289 aa5.17□□□□□ -1.58
UBR1-201ENST00000290650 PSMC6P62333 389 aa5.17□□□□□ -1.58
UBR1-201ENST00000290650 IRX4P78413 519 aa5.17□□□□□ -1.58
UBR1-201ENST00000290650 TMEM62Q0P6H9 643 aa5.17□□□□□ -1.58
UBR1-201ENST00000290650 TUBB2AQ13885 445 aa5.17□□□□□ -1.58
UBR1-201ENST00000290650 INTS8Q75QN2 995 aaKnown RBP5.17□□□□□ -1.58
UBR1-201ENST00000290650 FMNL3Q8IVF7 1028 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms