RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 H2AFVQ71UI9 128 aa14.45□□□□□ -0.1
SLC28A1-201ENST00000286749 SLFN12Q8IYM2 578 aa14.45□□□□□ -0.1
SLC28A1-201ENST00000286749 PRPF38AQ8NAV1 312 aaKnown RBP14.45□□□□□ -0.1
SLC28A1-201ENST00000286749 BCAS3Q9H6U6 928 aa14.45□□□□□ -0.1
SLC28A1-201ENST00000286749 GCNT4Q9P109 453 aa14.45□□□□□ -0.1
SLC28A1-201ENST00000286749 BCCIPQ9P287 314 aaKnown RBP eCLIP14.45□□□□□ -0.1
SLC28A1-201ENST00000286749 CYP3A7-CYP3A51PA0A087WV96 503 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 RSPH10B2B2RC85 870 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 SLC26A4O43511 780 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 FSBPO95073 299 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 NR3C1P04150 777 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 RSPH10BP0C881 870 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 CYP3A7P24462 503 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 JAM2P57087 298 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 DAAM2Q86T65 1068 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 ARFGAP2Q8N6H7 521 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 U2AF1L4Q8WU68 220 aaKnown RBP14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 DNM3Q9UQ16 869 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 STXBP5LQ9Y2K9 1186 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 ASTN1O14525 1302 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 CCDC188H7C350 402 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 DDX3XO00571 662 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 PDXKO00764 312 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 CLIC2O15247 247 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 TTI1O43156 1089 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 SPATA31C1P0DKV0 1188 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 SLFN11Q7Z7L1 901 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 VPS36Q86VN1 386 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 SYT2Q8N9I0 419 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 ETNPPLQ8TBG4 499 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 SLC35C1Q96A29 364 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 MBOAT7Q96N66 472 aa14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 P2RX7Q99572 595 aaKnown RBP14.44□□□□□ -0.1
SLC28A1-201ENST00000286749 ARHGAP4P98171 946 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 IFT88Q13099 833 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 NT5DC3Q86UY8 548 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 RASGEF1CQ8N431 466 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 ERMNQ8TAM6 284 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 LMBR1Q8WVP7 490 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 CELF4Q9BZC1 486 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 USP40Q9NVE5 1235 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 SUCLA2Q9P2R7 463 aaPredicted RBP14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 C10orf71Q711Q0 1435 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 MEIS2O14770 477 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 RIMBP2O15034 1052 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 GFPT2O94808 682 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 CYP4A11Q02928 519 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 KCNA1Q09470 495 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 CRY2Q49AN0 593 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 YTHDF3Q7Z739 585 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 CYFIP2Q96F07 1278 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 RBM17Q96I25 401 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 GLT8D2Q9H1C3 349 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 TYW1Q9NV66 732 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 SLC12A6Q9UHW9 1150 aa14.43□□□□□ -0.1
SLC28A1-201ENST00000286749 FAM170AA1A519 330 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 GCNT3O95395 438 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 RPA1P27694 616 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 TMOD1P28289 359 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 MNAT1P51948 309 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 BIRC3Q13489 604 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 ODF2Q5BJF6 829 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 RUFY4Q6ZNE9 571 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 FAM196AQ6ZSG2 479 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 MXD3Q9BW11 206 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 DPH5Q9H2P9 285 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SLITRK6Q9H5Y7 841 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 MYO3BQ8WXR4 1341 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 A0A0A6YYK5 440 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SRRM3A6NNA2 597 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 ANXA13P27216 316 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SCNN1DP51172 638 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 GALCP54803 685 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SNAP25P60880 206 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SHROOM1Q2M3G4 852 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 TMC3Q7Z5M5 1100 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SYCE1Q8N0S2 351 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 CERS5Q8N5B7 392 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 RUSC1Q9BVN2 902 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 BHMT2Q9H2M3 363 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 IKZF4Q9H2S9 585 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 METTL14Q9HCE5 456 aaKnown RBP14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 OSGEPQ9NPF4 335 aa14.42□□□□□ -0.1
SLC28A1-201ENST00000286749 SLC16A3O15427 465 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 RPL13P26373 211 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 MTMR3Q13615 1198 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 CCDC26Q8TAB7 109 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 LNX1Q8TBB1 728 aaPredicted RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 CRYGNQ8WXF5 182 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 LENG9Q96B70 501 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 HES6Q96HZ4 224 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 CEP89Q96ST8 783 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 CNOT8Q9UFF9 292 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 NOVA2Q9UNW9 492 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 LY75O60449 1722 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 GMNCA6NCL1 334 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 DCDC2CA8MYV0 355 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 TBCAO75347 108 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 FGGP02679 453 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms