RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 GJA3Q9Y6H8 435 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 CDK5RAP2Q96SN8 1893 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 SART1O43290 800 aaKnown RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 SLC37A4O43826 429 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 PPP1R12BO60237 982 aaPredicted RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 RPSAP08865 295 aaKnown RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 PPP2R2AP63151 447 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 AMPD3Q01432 767 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TNIP1Q15025 636 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 PLCB4Q15147 1175 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 NONOQ15233 471 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 GUF1Q8N442 669 aaKnown RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 DAGLBQ8NCG7 672 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 LARP4BQ92615 738 aaKnown RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 DDX12PQ92771 950 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 AK8Q96MA6 479 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 DPH5Q9H2P9 285 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 MAGEF1Q9HAY2 307 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 CEP72Q9P209 647 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TDP2O95551 362 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
SCLT1-201ENST00000281142 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 ACCSLQ4AC99 568 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 ANKS1AQ92625 1134 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 IQCDQ96DY2 449 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 LAD1O00515 517 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 RTN2O75298 545 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 KIF4AO95239 1232 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 CRYMQ14894 314 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 SCFD2Q8WU76 684 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 TAF4BQ92750 862 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 TBC1D31Q96DN5 1066 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-201ENST00000281142 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
SCLT1-201ENST00000281142 KIF3CO14782 793 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 TTI1O43156 1089 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 MAP2K1Q02750 393 aaPredicted RBP12.37□□□□□ -0.43
SCLT1-201ENST00000281142 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 ARFGAP2Q8N6H7 521 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
SCLT1-201ENST00000281142 AGBL3Q8NEM8 1001 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 TATDN2Q93075 761 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 HVCN1Q96D96 273 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 NOC2LQ9Y3T9 749 aaKnown RBP12.37□□□□□ -0.43
SCLT1-201ENST00000281142 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 KLRF2D3W0D1 207 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 COPB2P35606 906 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 PTK2Q05397 1052 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 COBLL1Q53SF7 1204 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 UBAP2Q5T6F2 1119 aaKnown RBP12.37□□□□□ -0.43
SCLT1-201ENST00000281142 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 TMEM47Q9BQJ4 181 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 ACTR5Q9H9F9 607 aaPredicted RBP12.37□□□□□ -0.43
SCLT1-201ENST00000281142 NR2E1Q9Y466 385 aa12.37□□□□□ -0.43
SCLT1-201ENST00000281142 NPHP3-ACAD11A0A0J9YXS1 232 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 TMCO5BA8MYB1 307 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 EDIL3O43854 480 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 DRD4P21917 467 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 CCNHP51946 323 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ZNF571Q7Z3V5 609 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 CPLX4Q7Z7G2 160 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 CCT6BQ92526 530 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 CDK5RAP3Q96JB5 506 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ZMYND12Q9H0C1 365 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 DAGLAQ9Y4D2 1042 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 LAMB1P07942 1786 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 GAKO14976 1311 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 DDNO94850 711 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 PPP1R2P41236 205 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 CRKP46108 304 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 GSTO1P78417 241 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 DHX9Q08211 1270 aaKnown RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 GPC2Q8N158 579 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 UBA5Q9GZZ9 404 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 IRF6O14896 467 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 SKAP2O75563 359 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 SHBGP04278 402 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 COASYQ13057 564 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 DRP2Q13474 957 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ASIC2Q16515 512 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ZCWPW2Q504Y3 356 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 TMC3Q7Z5M5 1100 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms