RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 FDPSP14324 419 aaKnown RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 CXCR5P32302 372 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 EIF2AK1Q9BQI3 630 aaKnown RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 SNX25Q9H3E2 840 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 PCDHA13Q9Y5I0 950 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 H7C0C1 242 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 ATP5OP48047 213 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 TAB3Q8N5C8 712 aaPredicted RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 UHMK1Q8TAS1 419 aaKnown RBP16.67■□□□□ 0.26
TIMP3-201ENST00000266085 TEX13BQ9BXU2 312 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 ZMYND15Q9H091 742 aa16.67■□□□□ 0.26
TIMP3-201ENST00000266085 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 MOCS3O95396 460 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 FCER1AP12319 257 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 FGFR2P21802 821 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 NME8Q8N427 588 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 IFT122Q9HBG6 1241 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 RGL1Q9NZL6 768 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 RNF40O75150 1001 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 INPP5BP32019 993 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 PSMC5P62195 406 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 RNASELQ05823 741 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 SEMA3FQ13275 785 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 DNAJC24Q6P3W2 148 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 RSRC2Q7L4I2 434 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 TTLL4Q14679 1199 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 RINT1Q6NUQ1 792 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 CAPN12Q6ZSI9 719 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 MGARPQ8TDB4 240 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 ZNF302Q9NR11 478 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 HSPA6P17066 643 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 GCLMP48507 274 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 APBA1Q02410 837 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 KNOP1Q1ED39 458 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 ZNF280CQ8ND82 737 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
TIMP3-201ENST00000266085 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
TIMP3-201ENST00000266085 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
TIMP3-201ENST00000266085 GOLGA8KD6RF30 607 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 MED7O43513 233 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 TROAPQ12815 778 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 ANKRD20A3Q5VUR7 823 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 FASTKD5Q7L8L6 764 aaKnown RBP16.65■□□□□ 0.26
TIMP3-201ENST00000266085 STMN2Q93045 179 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 MYOZ2Q9NPC6 264 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 AFAP1L2Q8N4X5 818 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 CCSER1Q9C0I3 900 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 PCDHA10Q9Y5I2 948 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 SRGNP10124 158 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 PDIA5Q14554 519 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 ZNF668Q96K58 619 aaPredicted RBP16.65■□□□□ 0.26
TIMP3-201ENST00000266085 FAM114A2Q9NRY5 505 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 MKRN1Q9UHC7 482 aaKnown RBP16.65■□□□□ 0.26
TIMP3-201ENST00000266085 SLIT1O75093 1534 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 KCNH2Q12809 1159 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 NFIAQ12857 509 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 EPHA7Q15375 998 aa16.65■□□□□ 0.26
TIMP3-201ENST00000266085 BCL9O00512 1426 aa16.64■□□□□ 0.26
TIMP3-201ENST00000266085 REREQ9P2R6 1566 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 ARHGAP25P42331 645 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 CASP7P55210 303 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 HDLBPQ00341 1268 aaKnown RBP16.64■□□□□ 0.25
TIMP3-201ENST00000266085 SGO2Q562F6 1265 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 PBKQ96KB5 322 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 MMP19Q99542 508 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 KIAA1586Q9HCI6 787 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 TTC31Q49AM3 519 aaPredicted RBP16.64■□□□□ 0.25
TIMP3-201ENST00000266085 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 DNAJC12Q9UKB3 198 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 FER1L4A9Z1Z3 1794 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 CCDC151A5D8V7 595 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 MYL3P08590 195 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 ATP1A2P50993 1020 aa16.64■□□□□ 0.25
TIMP3-201ENST00000266085 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
TIMP3-201ENST00000266085 PRMT6Q96LA8 375 aaPredicted RBP16.64■□□□□ 0.25
TIMP3-201ENST00000266085 GNGT1P63211 74 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 SF3A3Q12874 501 aaKnown RBP eCLIP16.63■□□□□ 0.25
TIMP3-201ENST00000266085 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 SH2D3AQ9BRG2 576 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 CEP72Q9P209 647 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 ARHGEF28Q8N1W1 1705 aaKnown RBP16.63■□□□□ 0.25
TIMP3-201ENST00000266085 ZMYND10O75800 440 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms