RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 NOVA2Q9UNW9 492 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 CCDC188H7C350 402 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 LIFRP42702 1097 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CTSWP56202 376 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CCZ1BP86790 482 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CCZ1P86791 482 aaPredicted RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TFAP4Q01664 338 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 MMEL1Q495T6 779 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CRELD2Q6UXH1 353 aaPredicted RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TRPM8Q7Z2W7 1104 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZNF579Q8NAF0 562 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 CCT7Q99832 543 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 LRRIQ1Q96JM4 1722 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ATF7P17544 494 aaPredicted RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 MYL7Q01449 175 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 BFSP1Q12934 665 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ANO5Q75V66 913 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ARHGEF25Q86VW2 580 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 MRRFQ96E11 262 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 FAM129AQ9BZQ8 928 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 FHDC1Q9C0D6 1143 aaPredicted RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 MRPL46Q9H2W6 279 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 IFT122Q9HBG6 1241 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 GGA1Q9UJY5 639 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 BAG5Q9UL15 447 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 BUB1O43683 1085 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 STRNO43815 780 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 HDLBPQ00341 1268 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TRIM55Q9BYV6 548 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ANLNQ9NQW6 1124 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 MAN1B1Q9UKM7 699 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ITM2BQ9Y287 266 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 STAM2O75886 525 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DDHD2O94830 711 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ST13P50502 369 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 CACNA2D1P54289 1103 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZMYM1Q5SVZ6 1142 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZNF229Q9UJW7 825 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ATP6V1G2O95670 118 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 EIF2S1P05198 315 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 KRT76Q01546 638 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 MYBPC2Q14324 1141 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 HACE1Q8IYU2 909 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 SKA1Q96BD8 255 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 TMEM60Q9H2L4 133 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 GCNT4Q9P109 453 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DIS3Q9Y2L1 958 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 HNRNPCL1O60812 293 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 NDUFA10O95299 355 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 SERPINB8P50452 374 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ICA1LQ8NDH6 482 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 RFWD2Q8NHY2 731 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 EURLQ9NYK6 297 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 MBD5Q9P267 1494 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 PLEKHG3A1L390 1219 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 GOLGA8CPA6NN73 597 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ZAP70P43403 619 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PPM1FP49593 454 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 NELFCDQ8IXH7 590 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 SCYL1Q96KG9 808 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 KIAA0100Q14667 2235 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 CD19P15391 556 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 AP1B1Q10567 949 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 APOA5Q6Q788 366 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 TOGARAM2Q6ZUX3 1019 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ANGPTL3Q9Y5C1 460 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CPSF1Q10570 1443 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 HECW2Q9P2P5 1572 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ZNF318Q5VUA4 2279 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ANO9A1A5B4 782 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 K7ENM7 598 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ENC1O14682 589 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MCF2P10911 925 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 KIF23Q02241 960 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 CCDC153Q494R4 210 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 STAMQ92783 540 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 THAP11Q96EK4 314 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 RIOK1Q9BRS2 568 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 KLHL25Q9H0H3 589 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 SLC39A2Q9NP94 309 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PICK1Q9NRD5 415 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PCDHA13Q9Y5I0 950 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 RPAP1Q9BWH6 1393 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 hCG_1642624A0A1W2PR95 340 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 hCG_1984214I3L0E3 225 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CYTH3O43739 400 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PRDM1O75626 825 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CAV1Q03135 178 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 E4F1Q66K89 784 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 ATG16L1Q676U5 607 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ZNF713Q8N859 430 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 SEPT8Q92599 483 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CCDC124Q96CT7 223 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 MTA3Q9BTC8 594 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MXD3Q9BW11 206 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MRPL47Q9HD33 250 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 CYP2J2P51589 502 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms