RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SOWAHBA6NEL2 793 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 CETN3O15182 167 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 EIF3DO15371 548 aaKnown RBP eCLIP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 CALUO43852 315 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 SORBS3O60504 671 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 FECHP22830 423 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 MARSP56192 900 aaKnown RBP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 PCMTD1Q96MG8 357 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 TTYH3Q9C0H2 523 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 JPH1Q9HDC5 661 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 SLC9A2Q9UBY0 812 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 LUC7L2Q9Y383 392 aaKnown RBP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 SP4Q02446 784 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 RAD9BQ6WBX8 426 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 REXO1L1PQ8IX06 675 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-201ENST00000263559 NUP58Q9BVL2 599 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 PPP2R2CQ9Y2T4 447 aa17.43■□□□□ 0.38
VPS26A-201ENST00000263559 BACH1O14867 736 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 TGFB1I1O43294 461 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 CCP110O43303 1012 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
VPS26A-201ENST00000263559 SLC25A27O95847 323 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 TRIM21P19474 475 aaKnown RBP17.42■□□□□ 0.38
VPS26A-201ENST00000263559 PLA2G4FQ68DD2 849 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 IKZF4Q9H2S9 585 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 GABBR1Q9UBS5 961 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 ICAM3P32942 547 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 NPEPPSP55786 919 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 SEPT14Q6ZU15 432 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 TRIM59Q8IWR1 403 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 RETREG2Q8NC44 543 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
VPS26A-201ENST00000263559 ANKEF1Q9NU02 776 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 AGPAT5Q9NUQ2 364 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 SIK3Q9Y2K2 1263 aa17.42■□□□□ 0.38
VPS26A-201ENST00000263559 ZMYM2Q9UBW7 1377 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 ACTR2P61160 394 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 ERVK-24P63145 666 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 XKR9Q5GH70 373 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 SWSAP1Q6NVH7 229 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 ANO5Q75V66 913 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 OR8K1Q8NGG5 319 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 DESI2Q9BSY9 194 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 CLIC2O15247 247 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 ZSCAN12O43309 604 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 ZNF862O60290 1169 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 NR3C1P04150 777 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 PSAPP07602 524 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 EDNRBP24530 442 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 TMTC1Q8IUR5 882 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 DNAJC7Q99615 494 aa17.41■□□□□ 0.38
VPS26A-201ENST00000263559 FIGNQ5HY92 759 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 ABHD15Q6UXT9 468 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 CYFIP1Q7L576 1253 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 ZNF592Q92610 1267 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 STRA6Q9BX79 667 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.4■□□□□ 0.38
VPS26A-201ENST00000263559 ZNFX1Q9P2E3 1918 aaKnown RBP17.4■□□□□ 0.38
VPS26A-201ENST00000263559 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
VPS26A-201ENST00000263559 UNCXA6NJT0 531 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 PGK2P07205 417 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 TERF1P54274 439 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 CCDC60Q8IWA6 550 aaPredicted RBP17.4■□□□□ 0.38
VPS26A-201ENST00000263559 SMCR8Q8TEV9 937 aaPredicted RBP17.4■□□□□ 0.38
VPS26A-201ENST00000263559 ATP6V0A1Q93050 837 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
VPS26A-201ENST00000263559 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
VPS26A-201ENST00000263559 STBD1O95210 358 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 CYP2C8P10632 490 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 RPL13P26373 211 aaKnown RBP17.39■□□□□ 0.37
VPS26A-201ENST00000263559 CYP26C1Q6V0L0 522 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 STXBP4Q6ZWJ1 553 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 CHP1Q99653 195 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 MMRN2Q9H8L6 949 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 PPP1R37O75864 691 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 AKAP3O75969 853 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 KCNMA1Q12791 1236 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 FRMD5Q7Z6J6 570 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 GPRC5CQ9NQ84 441 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 FAM207AQ9NSI2 230 aaPredicted RBP17.39■□□□□ 0.37
VPS26A-201ENST00000263559 UBE4BO95155 1302 aa17.39■□□□□ 0.37
VPS26A-201ENST00000263559 EPHB6O15197 1021 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 PLS3P13797 630 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 CASP4P49662 377 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 ZBED6P86452 979 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 MKRN3Q13064 507 aaKnown RBP17.38■□□□□ 0.37
VPS26A-201ENST00000263559 WDR59Q6PJI9 974 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.38■□□□□ 0.37
VPS26A-201ENST00000263559 OTUD6AQ7L8S5 288 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 FAM184BQ9ULE4 1060 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 ADGRG1Q9Y653 693 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 ARID2Q68CP9 1835 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 A0A1W2PQJ5 194 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms