RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 CYP2B6P20813 491 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 GPC3P51654 580 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
SPG11-201ENST00000261866 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
SPG11-201ENST00000261866 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 THOC1Q96FV9 657 aaKnown RBP13.1□□□□□ -0.31
SPG11-201ENST00000261866 TRPC7Q9HCX4 862 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 NEMP1O14524 444 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ZNF699Q32M78 642 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 HEY1Q9Y5J3 304 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ERCC6L2Q5T890 1561 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 ANGPTL8Q6UXH0 198 aa13.1□□□□□ -0.31
SPG11-201ENST00000261866 SLFN14P0C7P3 912 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 IFNAR1P17181 557 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PMLP29590 882 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 ZNF667Q5HYK9 610 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SPOPLQ6IQ16 392 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SARS2Q9NP81 518 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 TYW1Q9NV66 732 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 CDC27P30260 824 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 CLNS1AP54105 237 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 ACBD5Q5T8D3 534 aaPredicted RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SYNMO15061 1565 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 GNAT1P11488 350 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 ATICP31939 592 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 EZH2Q15910 746 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 MAPK6Q16659 721 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PODNQ7Z5L7 613 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 URGCPQ8TCY9 931 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 ABCA8O94911 1581 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 TDP2O95551 362 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 CPB1P15086 417 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SERPINB6P35237 376 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 LRRC8CQ8TDW0 803 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 TCP11Q8WWU5 503 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 IQCDQ96DY2 449 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 BRIP1Q9BX63 1249 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 GPC4O75487 556 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 RAB44Q7Z6P3 723 aaPredicted RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 STK17AQ9UEE5 414 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PCSK1NQ9UHG2 260 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SLC8A2Q9UPR5 921 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 BBS9Q3SYG4 887 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 TCP11X2Q5H9J9 407 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
SPG11-201ENST00000261866 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 SYNDIG1Q9H7V2 258 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 GINM1Q9NU53 330 aa13.09□□□□□ -0.31
SPG11-201ENST00000261866 KRT3P12035 628 aa13.08□□□□□ -0.31
SPG11-201ENST00000261866 ATP1A3P13637 1013 aa13.08□□□□□ -0.31
SPG11-201ENST00000261866 JAK3P52333 1124 aa13.08□□□□□ -0.31
SPG11-201ENST00000261866 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.31
SPG11-201ENST00000261866 MAGEF1Q9HAY2 307 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 KLHL14Q9P2G3 628 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 RWDD2AQ9UIY3 292 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 M0QYV0 167 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 LCP1P13796 627 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 NUMBP49757 651 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 ASPHQ12797 758 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 SLMAPQ14BN4 828 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
SPG11-201ENST00000261866 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPG11-201ENST00000261866 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 HUS1O60921 280 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 ECEL1O95672 775 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 PHKA2P46019 1235 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 AFF4Q9UHB7 1163 aaKnown RBP13.08□□□□□ -0.32
SPG11-201ENST00000261866 TNS3Q68CZ2 1445 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 MAP7Q14244 749 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
SPG11-201ENST00000261866 MSH2P43246 934 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
SPG11-201ENST00000261866 SIK2Q9H0K1 926 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms