RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CENPFP49454 3210 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 RSPH10B2B2RC85 870 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 KRIT1O00522 736 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 RSPH10BP0C881 870 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 LSP1P33241 339 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 IFT88Q13099 833 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 ZYXQ15942 572 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 MEI1Q5TIA1 1274 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.81■□□□□ 0.121e-6■■■■■ 105
SFSWAP-201ENST00000261674 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 GCNT3O95395 438 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 CTNNA1P35221 906 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 CASP4P49662 377 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 KCNA1Q09470 495 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 ZCWPW2Q504Y3 356 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 GLE1Q53GS7 698 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 CIAPIN1Q6FI81 312 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 DAAM2Q86T65 1068 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 USP38Q8NB14 1042 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 CAVIN3Q969G5 261 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 EFCC1Q9HA90 598 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 GFPT2O94808 682 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 XRCC5P13010 732 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 ITGA4P13612 1032 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 UCHL3P15374 230 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 CDC37Q16543 378 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 SLF2Q8IX21 1173 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 RDH13Q8NBN7 331 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNF526Q8TF50 670 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 KAT2BQ92831 832 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 COL4A5P29400 1685 aa15.81■□□□□ 0.12
SFSWAP-201ENST00000261674 ROBO3Q96MS0 1386 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 SMIM23A6NLE4 172 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 SART1O43290 800 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 MYBP10242 640 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNF76P36508 570 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 ERVK-9P63128 1117 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 COBLL1Q53SF7 1204 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 DHX37Q8IY37 1157 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 CELF4Q9BZC1 486 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 EDEM3Q9BZQ6 932 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 GOPCQ9HD26 462 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 GDF3Q9NR23 364 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 RNF181Q9P0P0 153 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 MYO1FO00160 1098 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 ZBTB5O15062 677 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 CHMP2AO43633 222 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 TMOD1P28289 359 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 COPB2P35606 906 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 PLS1Q14651 629 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNF541Q9H0D2 1346 aa15.8■□□□□ 0.12
SFSWAP-201ENST00000261674 DAPK3O43293 454 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 KIF4AO95239 1232 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 QRICH1Q2TAL8 776 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 KSR1Q8IVT5 923 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 PIGOQ8TEQ8 1089 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 CEP63Q96MT8 703 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 BHMT2Q9H2M3 363 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 RNF14Q9UBS8 474 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 DNM3Q9UQ16 869 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 GCOM1H8Y6P7 765 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 GNA14O95837 355 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 MYZAPP0CAP1 466 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 HOXA13P31271 388 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 PDE4CQ08493 712 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 PPP4R3AQ6IN85 833 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 MICALL2Q8IY33 904 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 METTL13Q8N6R0 699 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 DHX36Q9H2U1 1008 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 TLDC2A0PJX2 215 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 LLGL1Q15334 1064 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 ARSHQ5FYA8 562 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNF572Q7Z3I7 529 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 CATSPER3Q86XQ3 398 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 ATP6V1G3Q96LB4 118 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 TAF1DQ9H5J8 278 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 SCN9AQ15858 1988 aa15.79■□□□□ 0.12
SFSWAP-201ENST00000261674 ABCB11O95342 1321 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 AFPP02771 609 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 FLT3P36888 993 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 CC2D2BQ6DHV5 1058 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 B4GALNT4Q76KP1 1039 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 UHMK1Q8TAS1 419 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 REEP2Q9BRK0 252 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 RGL1Q9NZL6 768 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 NAGPAQ9UK23 515 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 PPP1R37O75864 691 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 AKAP3O75969 853 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 IFFO1Q0D2I5 559 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 GPATCH11Q8N954 259 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 CYP2W1Q8TAV3 490 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 PIK3R5Q8WYR1 880 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 CCT8L2Q96SF2 557 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms