RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 STOML1Q9UBI4 398 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 DBR1Q9UK59 544 aaKnown RBP17.49■□□□□ 0.39
SREBF1-201ENST00000261646 SLC16A2P36021 539 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-201ENST00000261646 CYTH2Q99418 400 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 DNAJC12Q9UKB3 198 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 MAP3K7O43318 606 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 GAS7O60861 476 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 SCNN1DP51172 638 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 ZYXQ15942 572 aaKnown RBP17.48■□□□□ 0.39
SREBF1-201ENST00000261646 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 ZNF804BA4D1E1 1349 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 KIF3CO14782 793 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 FAM153BP0C7A2 387 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 ESRRAP11474 423 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-201ENST00000261646 MAPK4P31152 587 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 FAM153CQ494X1 144 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 AENQ8WTP8 325 aaKnown RBP17.48■□□□□ 0.39
SREBF1-201ENST00000261646 FAM153AQ9UHL3 310 aa17.48■□□□□ 0.39
SREBF1-201ENST00000261646 USP15Q9Y4E8 981 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-201ENST00000261646 PAX7P23759 505 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 PHBP35232 272 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 LGSNQ5TDP6 509 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 SPATA21Q7Z572 469 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 HOOK2Q96ED9 719 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 FGFR1OP2Q9NVK5 253 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 ARHGAP20Q9P2F6 1191 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 A0A0G2JND7 137 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 ANP32DO95626 131 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 PRLRP16471 622 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
SREBF1-201ENST00000261646 SH2D4BQ5SQS7 431 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 SLC30A9Q6PML9 568 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 NSMFQ6X4W1 530 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 DNAJC5Q9H3Z4 198 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 DIP2BQ9P265 1576 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 K7ENM7 598 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 KCNQ2O43526 872 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 SERPINB6P35237 376 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 PSMC4P43686 418 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 EP400NLQ6ZTU2 488 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 LONP2Q86WA8 852 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 RAD54LQ92698 747 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 TMEM260Q9NX78 707 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 DCTN4Q9UJW0 460 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 STK24Q9Y6E0 443 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 A0A087X0B3 334 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
SREBF1-201ENST00000261646 DCTN3O75935 186 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 NAB2Q15742 525 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 MSL3Q8N5Y2 521 aaKnown RBP17.47■□□□□ 0.39
SREBF1-201ENST00000261646 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 IRAK4Q9NWZ3 460 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 GGA1Q9UJY5 639 aa17.47■□□□□ 0.39
SREBF1-201ENST00000261646 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 A0A1W2PQJ5 194 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 UBAP1LF5GYI3 381 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 ACTN1P12814 892 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 MDM2Q00987 491 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-201ENST00000261646 BFSP1Q12934 665 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-201ENST00000261646 RHOT2Q8IXI1 618 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 CNPY4Q8N129 248 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 ARL2BPQ9Y2Y0 163 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 GYG2O15488 501 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 DLATP10515 647 aaKnown RBP17.46■□□□□ 0.39
SREBF1-201ENST00000261646 PMS1P54277 932 aaKnown RBP17.46■□□□□ 0.39
SREBF1-201ENST00000261646 ITIH3Q06033 890 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 SPARCL1Q14515 664 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
SREBF1-201ENST00000261646 LRRC34Q8IZ02 419 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 FERMT1Q9BQL6 677 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 BHMT2Q9H2M3 363 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 RAB20Q9NX57 234 aa17.46■□□□□ 0.39
SREBF1-201ENST00000261646 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
SREBF1-201ENST00000261646 A0A087X0T9 212 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 FAM228BP0C875 321 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 MAN1A1P33908 653 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 SEMA3FQ13275 785 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.38
SREBF1-201ENST00000261646 KIAA1755Q5JYT7 1200 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 SWT1Q5T5J6 900 aaKnown RBP17.46■□□□□ 0.38
SREBF1-201ENST00000261646 EPM2AIP1Q7L775 607 aaPredicted RBP17.46■□□□□ 0.38
SREBF1-201ENST00000261646 RSAD2Q8WXG1 361 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 ZKSCAN4Q969J2 545 aaPredicted RBP17.46■□□□□ 0.38
SREBF1-201ENST00000261646 TMBIM4Q9HC24 238 aa17.46■□□□□ 0.38
SREBF1-201ENST00000261646 FAM187AA6NFU0 413 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 TOM1O60784 492 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 SETSIPP0DME0 302 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 CCND1P24385 295 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 BTDP43251 543 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 ERFP50548 548 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 RWDD2BP57060 319 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 SEPT6Q14141 434 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 TTI2Q6NXR4 508 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms