RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FAM205AQ6ZU69 1335 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 A0A1B0GVG6 124 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 BTNL10A8MVZ5 291 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 E7ENQ6 273 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 O00370 1275 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 PDE8BO95263 885 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 CSF1RP07333 972 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 PLTPP55058 493 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 DIXDC1Q155Q3 683 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 TSNAXIP1Q2TAA8 658 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 LRRC23Q53EV4 343 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 LRRC57Q8N9N7 239 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 FAM81AQ8TBF8 368 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 TBC1D16Q8TBP0 767 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 ATP8B4Q8TF62 1192 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 CHCHD3Q9NX63 227 aaKnown RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 DLGAP2Q9P1A6 1054 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 TTC36A6NLP5 189 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 SMIM22K7EJ46 135 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 DDAH1O94760 285 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 SP100P23497 879 aaPredicted RBP7.84□□□□□ -1.16
CSDE1-201ENST00000261443 PEX5P50542 639 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 CHRNA2Q15822 529 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 TXNRD1Q16881 649 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 RNF220Q5VTB9 566 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 APBB1IPQ7Z5R6 666 aaPredicted RBP7.84□□□□□ -1.16
CSDE1-201ENST00000261443 CROCCP2Q86T23 111 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 TRIM74Q86UV6 250 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 TRIM73Q86UV7 250 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 RASGEF1CQ8N431 466 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 EPS8L3Q8TE67 593 aaKnown RBP7.84□□□□□ -1.16
CSDE1-201ENST00000261443 SDR42E1Q8WUS8 393 aa7.84□□□□□ -1.16
CSDE1-201ENST00000261443 RBM41Q96IZ5 413 aaKnown RBP7.84□□□□□ -1.16
CSDE1-201ENST00000261443 G3BP2Q9UN86 482 aaKnown RBP7.84□□□□□ -1.16
CSDE1-201ENST00000261443 FLT1P17948 1338 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 PNPLA7Q6ZV29 1317 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 GJB6O95452 261 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 RFC5P40937 340 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 DR1Q01658 176 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 LRRC63Q05C16 580 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 INF2Q27J81 1249 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 C10orf76Q5T2E6 689 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 SOGA3Q5TF21 947 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 DNAAF5Q86Y56 855 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 PIGOQ8TEQ8 1089 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 TSG101Q99816 390 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 ISCA1Q9BUE6 129 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 GREM2Q9H772 168 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 ZDHHC18Q9NUE0 388 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 LMCD1Q9NZU5 365 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 DBR1Q9UK59 544 aaKnown RBP7.83□□□□□ -1.16
CSDE1-201ENST00000261443 ZNF330Q9Y3S2 320 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-201ENST00000261443 DAAM1Q9Y4D1 1078 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 RPS6KL1Q9Y6S9 549 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 TNS3Q68CZ2 1445 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 STRCQ7RTU9 1775 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 UNC5CO95185 931 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 FGGP02679 453 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 TPBGLP0DKB5 382 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 CCNB1P14635 433 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 SKIV2L2P42285 1042 aaKnown RBP7.83□□□□□ -1.16
CSDE1-201ENST00000261443 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 LRRC55Q6ZSA7 311 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 LONP2Q86WA8 852 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 VGLL2Q8N8G2 317 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 HELBQ8NG08 1087 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-201ENST00000261443 TPCN2Q8NHX9 752 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 CNKSR2Q8WXI2 1034 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 DNAJC9Q8WXX5 260 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 KIFAP3Q92845 792 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 GPKOWQ92917 476 aaPredicted RBP eCLIP7.83□□□□□ -1.161e-7■□□□□ 10.5
CSDE1-201ENST00000261443 BICD1Q96G01 975 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 ERP44Q9BS26 406 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 CYP39A1Q9NYL5 469 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 PCDHA4Q9UN74 947 aa7.83□□□□□ -1.16
CSDE1-201ENST00000261443 RASGRF2O14827 1237 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PEX11AO75192 247 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ZBTB48P10074 688 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ACADSP16219 412 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PTK2Q05397 1052 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 DYNC1I2Q13409 638 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PRPF4BQ13523 1007 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 MUM1Q2TAK8 710 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 CMPK2Q5EBM0 449 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 DUPD1Q68J44 220 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SV2BQ7L1I2 683 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 DYMQ7RTS9 669 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ADAT2Q7Z6V5 191 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SYNE4Q8N205 404 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 GUF1Q8N442 669 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 UTP4Q969X6 686 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 RMDN2Q96LZ7 410 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 FGD4Q96M96 766 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 AK8Q96MA6 479 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 NUDCD1Q96RS6 583 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 DDX23Q9BUQ8 820 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SEMA4AQ9H3S1 761 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms