RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SSR1P43307 286 aaKnown RBP20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 PPP2R5CQ13362 524 aa20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 RRAGBQ5VZM2 374 aa20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 CALML4Q96GE6 196 aa20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 PLIN2Q99541 437 aa20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 TEKT3Q9BXF9 490 aa20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 PCNTO95613 3336 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 KLHL33A6NCF5 533 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 H0YHG0 523 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 PLCG1P19174 1290 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 SCP2P22307 547 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 SARNPP82979 210 aaKnown RBP20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 ITGB3BPQ13352 177 aaPredicted RBP20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 CASP8Q14790 479 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 NAALADL2Q58DX5 795 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 PDXDC2PQ6P474 469 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 ELOA2Q8IYF1 753 aaPredicted RBP20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 PPP2R2CQ9Y2T4 447 aa20.82■□□□□ 0.92
COL4A3BP-201ENST00000261415 FOXN1O15353 648 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 PDE4DQ08499 809 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 SEMA3FQ13275 785 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 GRB10Q13322 594 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 GRB14Q14449 540 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 GNPTABQ3T906 1256 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 KANK3Q6NY19 840 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 PLEKHH3Q7Z736 793 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 MPHOSPH6Q99547 160 aaKnown RBP20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 JPH2Q9BR39 696 aaPredicted RBP20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 FAM169AQ9Y6X4 670 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 B4DLN1 442 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 MAFGO15525 162 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 DHX15O43143 795 aaKnown RBP20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 CA12O43570 354 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 LRRC15Q8TF66 581 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 PNMA5Q96PV4 448 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 ANKZF1Q9H8Y5 726 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 VIPAS39Q9H9C1 493 aa20.81■□□□□ 0.92
COL4A3BP-201ENST00000261415 EML1O00423 815 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 CBFA2T2O43439 604 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 CHMP2AO43633 222 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 ATP9AO75110 1047 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 MDM2Q00987 491 aaPredicted RBP20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 PNOCQ13519 176 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 HAUS3Q68CZ6 603 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 B3GNT9Q6UX72 402 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 GRAMD1CQ8IYS0 662 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 ERMNQ8TAM6 284 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 CDK5RAP3Q96JB5 506 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 CDHR1Q96JP9 859 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 UNC45AQ9H3U1 944 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 HOOK1Q9UJC3 728 aaKnown RBP20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 KDM3AQ9Y4C1 1321 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 DDX39AO00148 427 aaKnown RBP20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 CHUKO15111 745 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 COBLO75128 1261 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 ALDH1A1P00352 501 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 CCT6AP40227 531 aaKnown RBP20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 POSTNQ15063 836 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 ZNF792Q3KQV3 632 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 FBXW10Q5XX13 1052 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 FAXDC2Q96IV6 333 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 WDR24Q96S15 920 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 ABCB6Q9NP58 842 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 TBC1D22BQ9NU19 505 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 KIAA1468Q9P260 1216 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 MCM8Q9UJA3 840 aa20.8■□□□□ 0.92
COL4A3BP-201ENST00000261415 THSD7BQ9C0I4 1608 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 BIRC2Q13490 618 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 HYIQ5T013 277 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 SH3RF1Q7Z6J0 888 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 PAGE5Q96GU1 130 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 ECM1Q16610 540 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 TMEM119Q4V9L6 283 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 CUEDC2Q9H467 287 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 STK24Q9Y6E0 443 aa20.79■□□□□ 0.92
COL4A3BP-201ENST00000261415 SPATA31C2B4DYI2 1134 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 SLC26A4O43511 780 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 SHOX2O60902 331 aaPredicted RBP20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 MED24O75448 989 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 KCNA2P16389 499 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 AFMP43652 599 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 AARSP49588 968 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■■■■■ 61.8
COL4A3BP-201ENST00000261415 CRYMQ14894 314 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 MORC4Q8TE76 937 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 PLEKHA4Q9H4M7 779 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 ATXN2Q99700 1313 aaKnown RBP20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 POTEB3A0JP26 581 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 SLC15A5A6NIM6 579 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 ECM2O94769 699 aaPredicted RBP20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 RPA1P27694 616 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 ICAM3P32942 547 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 POTEBQ6S5H4 581 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 SEPT14Q6ZU15 432 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 HOMEZQ8IX15 550 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 STAMQ92783 540 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 MTRQ99707 1265 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 EIF2AK1Q9BQI3 630 aaKnown RBP20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
COL4A3BP-201ENST00000261415 STK17AQ9UEE5 414 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms