RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PLAGL2Q9UPG8 496 aa19.5■□□□□ 0.71
SSB-201ENST00000260956 PES1O00541 588 aaKnown RBP19.49■□□□□ 0.71
SSB-201ENST00000260956 GCLCP48506 637 aaPredicted RBP19.49■□□□□ 0.71
SSB-201ENST00000260956 AMPD2Q01433 879 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 FAM110CQ1W6H9 321 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 SFR1Q86XK3 245 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 SLC35F6Q8N357 371 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 PURBQ96QR8 312 aaKnown RBP19.49■□□□□ 0.71
SSB-201ENST00000260956 TUFT1Q9NNX1 390 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 COL20A1Q9P218 1284 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 DNM3Q9UQ16 869 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 TRAF3IP3Q9Y228 551 aa19.49■□□□□ 0.71
SSB-201ENST00000260956 EIF3CLB5ME19 914 aaKnown RBP19.48■□□□□ 0.71
SSB-201ENST00000260956 ZNF263O14978 683 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 CEP55Q53EZ4 464 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 HERC4Q5GLZ8 1057 aaPredicted RBP19.48■□□□□ 0.71
SSB-201ENST00000260956 SLC30A10Q6XR72 485 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 CCDC170Q8IYT3 715 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 EIF3CQ99613 913 aaKnown RBP19.48■□□□□ 0.71
SSB-201ENST00000260956 EDEM3Q9BZQ6 932 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 PORCNQ9H237 461 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 HOXC10Q9NYD6 342 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 FAM53CQ9NYF3 392 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 RGL1Q9NZL6 768 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 TBC1D7Q9P0N9 293 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 TRIM10Q9UDY6 481 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 PPP1R9AQ9ULJ8 1098 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 RCCD1A6NED2 376 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 LCA5LO95447 670 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 MUTP22033 750 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 ERVK-9P63128 1117 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 CYP4A11Q02928 519 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 PPP2R3AQ06190 1150 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 ARHGAP29Q52LW3 1261 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 ZNF569Q5MCW4 686 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 DPY19L2P1Q6NXN4 242 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 REPS2Q8NFH8 660 aa19.48■□□□□ 0.71
SSB-201ENST00000260956 RSPH10B2B2RC85 870 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 VWA5AO00534 786 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 NOL4O94818 638 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 SLITRK3O94933 977 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 RSPH10BP0C881 870 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 PSMC4P43686 418 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 TMEM132BQ14DG7 1078 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 LRCH2Q5VUJ6 765 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 GPRC5AQ8NFJ5 357 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 BHMT2Q9H2M3 363 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 HAUS4Q9H6D7 363 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 BCAS3Q9H6U6 928 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 ZNF446Q9NWS9 450 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 ARHGAP20Q9P2F6 1191 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 WRAP73Q9P2S5 460 aaPredicted RBP19.47■□□□□ 0.71
SSB-201ENST00000260956 CDC23Q9UJX2 597 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
SSB-201ENST00000260956 ZMYM2Q9UBW7 1377 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 GNA14O95837 355 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 ARP10275 920 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 RINT1Q6NUQ1 792 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 C1orf186Q6ZWK4 172 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 NELFCDQ8IXH7 590 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 AGBL1Q96MI9 1066 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 FIZ1Q96SL8 496 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 NHEJ1Q9H9Q4 299 aaPredicted RBP19.46■□□□□ 0.71
SSB-201ENST00000260956 OLFML3Q9NRN5 406 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 ASTN1O14525 1302 aa19.46■□□□□ 0.71
SSB-201ENST00000260956 ZNF76P36508 570 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 SETQ01105 290 aaPredicted RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 ASTE1Q2TB18 679 aaPredicted RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 PDXDC1Q6P996 788 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 CCDC155Q8N6L0 562 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 UNC45AQ9H3U1 944 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 EFCC1Q9HA90 598 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 DDX41Q9UJV9 622 aaKnown RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 MKI67P46013 3256 aaKnown RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 NFIBO00712 420 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 KIF20AO95235 890 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 PLEKP08567 350 aaPredicted RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 MYBP10242 640 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 ITGB5P18084 799 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 ZNF131P52739 623 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 UBXN2AP68543 259 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 TUBB2AQ13885 445 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 NIPA1Q7RTP0 329 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 PRPF38AQ8NAV1 312 aaKnown RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 MNS1Q8NEH6 495 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 DYDC2Q96IM9 177 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 TUBB2BQ9BVA1 445 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 LACRTQ9GZZ8 138 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 EHMT1Q9H9B1 1298 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 SLC38A10Q9HBR0 1119 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 FAM207AQ9NSI2 230 aaPredicted RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 ZNF214Q9UL59 606 aaPredicted RBP19.45■□□□□ 0.7
SSB-201ENST00000260956 MYPNQ86TC9 1320 aa19.45■□□□□ 0.7
SSB-201ENST00000260956 CYLC1P35663 651 aaPredicted RBP19.44■□□□□ 0.7
SSB-201ENST00000260956 CTTNQ14247 550 aaKnown RBP19.44■□□□□ 0.7
SSB-201ENST00000260956 KNOP1Q1ED39 458 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms