RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SEL1LQ9UBV2 794 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 DNAJC25-GNG10A0A024R161 153 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 AKR1B15C9JRZ8 316 aaPredicted RBP24.69■■□□□ 1.54
SIX3-201ENST00000260653 ZNF862O60290 1169 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 CASP14P31944 242 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 DNM2P50570 870 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 NPEPPSP55786 919 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 ZC2HC1CQ53FD0 456 aaPredicted RBP24.69■■□□□ 1.54
SIX3-201ENST00000260653 SPRYD7Q5W111 196 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 ANO5Q75V66 913 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 NRDCO43847 1150 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 PSAPP07602 524 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 FXR1P51114 621 aaKnown RBP eCLIP24.68■■□□□ 1.54
SIX3-201ENST00000260653 FAM178BQ8IXR5 827 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 ANKRD13CQ8N6S4 541 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.68■■□□□ 1.54
SIX3-201ENST00000260653 MCM3APO60318 1980 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 UBA1P22314 1058 aaKnown RBP24.68■■□□□ 1.54
SIX3-201ENST00000260653 EDRF1Q3B7T1 1238 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 XKR9Q5GH70 373 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 ABHD15Q6UXT9 468 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 PPP4R3CPQ6ZMV5 832 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 TRAF3IP3Q9Y228 551 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 SLC45A1Q9Y2W3 748 aa24.68■■□□□ 1.54
SIX3-201ENST00000260653 A0A1W2PQC6 194 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 USP27XA6NNY8 438 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 MFAP3LO75121 409 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 GTF3C2Q8WUA4 911 aaPredicted RBP24.67■■□□□ 1.54
SIX3-201ENST00000260653 ATP6V0A1Q93050 837 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 CEP63Q96MT8 703 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 TBC1D8BQ0IIM8 1120 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 ZNF720Q7Z2F6 126 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 KSR1Q8IVT5 923 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 ZC3H3Q8IXZ2 948 aaKnown RBP24.67■■□□□ 1.54
SIX3-201ENST00000260653 SHCBP1Q8NEM2 672 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 GPRC5AQ8NFJ5 357 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 IKZF4Q9H2S9 585 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 ANKEF1Q9NU02 776 aa24.67■■□□□ 1.54
SIX3-201ENST00000260653 SOCS7O14512 581 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 EIF3DO15371 548 aaKnown RBP eCLIP24.66■■□□□ 1.54
SIX3-201ENST00000260653 NR2F2P24468 414 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 ADAM9Q13443 819 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 MAN2A1Q16706 1144 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 ANKRD23Q86SG2 305 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 BAG1Q99933 345 aaPredicted RBP24.66■■□□□ 1.54
SIX3-201ENST00000260653 ZMYM2Q9UBW7 1377 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 MYH9P35579 1960 aaKnown RBP24.66■■□□□ 1.54
SIX3-201ENST00000260653 RNF225M0QZC1 329 aaPredicted RBP24.66■■□□□ 1.54
SIX3-201ENST00000260653 PDXKO00764 312 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 ZBTB48P10074 688 aaPredicted RBP24.66■■□□□ 1.54
SIX3-201ENST00000260653 CCDC40Q4G0X9 1142 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 VWA3BQ502W6 1294 aa24.66■■□□□ 1.54
SIX3-201ENST00000260653 TYW1Q9NV66 732 aaKnown RBP24.66■■□□□ 1.54
SIX3-201ENST00000260653 OFD1O75665 1012 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 STBD1O95210 358 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 ITGBL1O95965 494 aaPredicted RBP24.65■■□□□ 1.54
SIX3-201ENST00000260653 SUPT20HL2P0C7V6 817 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 MIS18BP1Q6P0N0 1132 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 NDST4Q9H3R1 872 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 KLK7P49862 253 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 PRKCEQ02156 737 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 SYCP1Q15431 976 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 E4F1Q66K89 784 aaPredicted RBP24.65■■□□□ 1.54
SIX3-201ENST00000260653 PANX2Q96RD6 677 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 PTPN18Q99952 460 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 GPRC5CQ9NQ84 441 aa24.65■■□□□ 1.54
SIX3-201ENST00000260653 SYNGAP1Q96PV0 1343 aa24.64■■□□□ 1.54
SIX3-201ENST00000260653 TRMT1Q9NXH9 659 aaKnown RBP24.64■■□□□ 1.54
SIX3-201ENST00000260653 ARID2Q68CP9 1835 aa24.64■■□□□ 1.53
SIX3-201ENST00000260653 TGFB1I1O43294 461 aa24.64■■□□□ 1.53
SIX3-201ENST00000260653 FARP2O94887 1054 aaPredicted RBP24.64■■□□□ 1.53
SIX3-201ENST00000260653 HUNKP57058 714 aa24.64■■□□□ 1.53
SIX3-201ENST00000260653 TRIM14Q14142 442 aa24.64■■□□□ 1.53
SIX3-201ENST00000260653 CNGA4Q8IV77 575 aa24.64■■□□□ 1.53
SIX3-201ENST00000260653 LARSQ9P2J5 1176 aaKnown RBP24.64■■□□□ 1.53
SIX3-201ENST00000260653 IGSF9BQ9UPX0 1349 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 CETN3O15182 167 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 CALUO43852 315 aaPredicted RBP24.63■■□□□ 1.53
SIX3-201ENST00000260653 TPM1P09493 284 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 FKBP15Q5T1M5 1219 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 PAXIP1Q6ZW49 1069 aaPredicted RBP24.63■■□□□ 1.53
SIX3-201ENST00000260653 CCAR2Q8N163 923 aaKnown RBP24.63■■□□□ 1.53
SIX3-201ENST00000260653 MPHOSPH6Q99547 160 aaKnown RBP24.63■■□□□ 1.53
SIX3-201ENST00000260653 K7ENM7 598 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 DKC1O60832 514 aaKnown RBP eCLIP24.63■■□□□ 1.53
SIX3-201ENST00000260653 KCNJ6P48051 423 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 CCNA1P78396 465 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 LY6KQ17RY6 165 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 OTUD6AQ7L8S5 288 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 HOMEZQ8IX15 550 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 CEP170P1Q96L14 293 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 ERGIC2Q96RQ1 377 aa24.63■■□□□ 1.53
SIX3-201ENST00000260653 TULP1O00294 542 aaPredicted RBP24.62■■□□□ 1.53
SIX3-201ENST00000260653 STX10O60499 249 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 ATG7O95352 703 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 ARIH2O95376 493 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 GNA14O95837 355 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 MARSP56192 900 aaKnown RBP24.62■■□□□ 1.53
SIX3-201ENST00000260653 DNTTIP2Q5QJE6 756 aaKnown RBP24.62■■□□□ 1.53
SIX3-201ENST00000260653 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms