RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 RBM12Q9NTZ6 932 aaKnown RBP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 TYW1Q9NV66 732 aaKnown RBP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 CCPG1Q9ULG6 757 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 TISP43B9A030 160 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 TGFB1I1O43294 461 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 GFPT2O94808 682 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 ALAS1P13196 640 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 PAFAH1B1P43034 410 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 POLR3CQ9BUI4 534 aaPredicted RBP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 WDR11Q9BZH6 1224 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 PCIF1Q9H4Z3 704 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 TRAF3IP3Q9Y228 551 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 ZSCAN5CA6NGD5 496 aaPredicted RBP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 PDXKO00764 312 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 PRELPP51888 382 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 TUBB4BP68371 445 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 FAM178BQ8IXR5 827 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 LXNQ9BS40 222 aa12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 MRPL11Q9Y3B7 192 aaKnown RBP12.42□□□□□ -0.42
SLC3A1-201ENST00000260649 IPO5O00410 1097 aaKnown RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 EGFRP00533 1210 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 CYP3A4P08684 503 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 MARSP56192 900 aaKnown RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 FAM186BQ8IYM0 893 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 EDEM3Q9BZQ6 932 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 PARVGQ9HBI0 331 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 RAVER2Q9HCJ3 691 aaKnown RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 SEPT11Q9NVA2 429 aaKnown RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 COL20A1Q9P218 1284 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 RPL13P26373 211 aaKnown RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 CAP2P40123 477 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 CCDC70Q6NSX1 233 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 CCNI2Q6ZMN8 369 aaPredicted RBP12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 C1orf186Q6ZWK4 172 aa12.41□□□□□ -0.42
SLC3A1-201ENST00000260649 ARHGEF35A5YM69 484 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 PJA2O43164 708 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 SORBS3O60504 671 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 VIL1P09327 827 aaKnown RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 TCP1P17987 556 aaKnown RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 ARHGAP44Q17R89 818 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 MCTP2Q6DN12 878 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 IQCEQ6IPM2 695 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 GBP6Q6ZN66 633 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 IRF2BP2Q7Z5L9 587 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 DEFB132Q7Z7B7 95 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 RANBP17Q9H2T7 1088 aaKnown RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 MYCLP12524 364 aaPredicted RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 ITGB5P18084 799 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 EPHA7Q15375 998 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 U2AF1L4Q8WU68 220 aaKnown RBP12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 RPGRIP1Q96KN7 1286 aa12.4□□□□□ -0.42
SLC3A1-201ENST00000260649 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.43
SLC3A1-201ENST00000260649 HIP1RO75146 1068 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 LRRN2O75325 713 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 NAB2Q15742 525 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 C8orf74Q6P047 294 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 KLHL7Q8IXQ5 586 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 NIM1KQ8IY84 436 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 GMLQ99445 158 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 TEKT3Q9BXF9 490 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 LUC7LQ9NQ29 371 aaKnown RBP12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 AIPL1Q9NZN9 384 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 HPCAL4Q9UM19 191 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 COL4A5P29400 1685 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 GRID2IPA4D2P6 1211 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 WNT10BO00744 389 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 KCNK3O14649 394 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 GGCXP38435 758 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 HNRNPH2P55795 449 aaKnown RBP12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 CXCL9Q07325 125 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 RASA3Q14644 834 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 ZC3H3Q8IXZ2 948 aaKnown RBP12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 KRT12Q99456 494 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 EXOC3O60645 756 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 RNF40O75150 1001 aa12.39□□□□□ -0.43
SLC3A1-201ENST00000260649 ABCB4P21439 1286 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms