RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 HDAC6Q9UBN7 1215 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 CCDC39Q9UFE4 941 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 GTF2IRD1Q9UHL9 959 aa23.11■■□□□ 1.29
RTCA-201ENST00000260563 EVPLQ92817 2033 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 A0A087X0B3 334 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 SNX17Q15036 470 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 KARSQ15046 597 aaKnown RBP23.1■■□□□ 1.29
RTCA-201ENST00000260563 ZRSR1Q15695 479 aaKnown RBP23.1■■□□□ 1.29
RTCA-201ENST00000260563 CALML4Q96GE6 196 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 NT5C3AQ9H0P0 336 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 NRCAMQ92823 1304 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 COL1A2P08123 1366 aa23.1■■□□□ 1.29
RTCA-201ENST00000260563 C17orf102A2RUQ5 167 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 SLC26A4O43511 780 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 LYPLA2O95372 231 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 YWHABP31946 246 aaKnown RBP23.09■■□□□ 1.29
RTCA-201ENST00000260563 GRIK4Q16099 956 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 CCDC183Q5T5S1 534 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 TIGD1Q96MW7 591 aa23.09■■□□□ 1.29
RTCA-201ENST00000260563 INSRRP14616 1297 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 ECM1Q16610 540 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 DHX58Q96C10 678 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 CCDC43Q96MW1 224 aaKnown RBP23.08■■□□□ 1.29
RTCA-201ENST00000260563 NUP62CLQ9H1M0 184 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 CLSTN2Q9H4D0 955 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 KIAA1024Q9UPX6 916 aa23.08■■□□□ 1.29
RTCA-201ENST00000260563 STBD1O95210 358 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 GNAT1P11488 350 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 CDK7P50613 346 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 IGBP1P78318 339 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 LRRC26Q2I0M4 334 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 TRIM60Q495X7 471 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 LONRF3Q496Y0 759 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 ZNF484Q5JVG2 852 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 HYIQ5T013 277 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 ANO5Q75V66 913 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 OTUD6AQ7L8S5 288 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 IQUBQ8NA54 791 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 NACC1Q96RE7 527 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 SETD4Q9NVD3 440 aa23.08■■□□□ 1.28
RTCA-201ENST00000260563 TMEM150BA6NC51 233 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 RRN3P2A6NIE6 340 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 PQBP1O60828 265 aaKnown RBP23.07■■□□□ 1.28
RTCA-201ENST00000260563 HOXC8P31273 242 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 RTP1P59025 263 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 E2F4Q16254 413 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 MTERF2Q49AM1 385 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 RRAGBQ5VZM2 374 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 PLA2G4FQ68DD2 849 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 GDF6Q6KF10 455 aaPredicted RBP23.07■■□□□ 1.28
RTCA-201ENST00000260563 KRBA2Q6ZNG9 492 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 CNNM3Q8NE01 707 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 NIFKQ9BYG3 293 aaKnown RBP23.07■■□□□ 1.28
RTCA-201ENST00000260563 USP25Q9UHP3 1055 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 SERTAD1Q9UHV2 236 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 ATP11BQ9Y2G3 1177 aa23.07■■□□□ 1.28
RTCA-201ENST00000260563 ACTN4O43707 911 aaKnown RBP23.06■■□□□ 1.28
RTCA-201ENST00000260563 STAT6P42226 847 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 GRB10Q13322 594 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 CAMK4Q16566 473 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 TMEM119Q4V9L6 283 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 FAM126BQ8IXS8 530 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 PIGOQ8TEQ8 1089 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 PNMA5Q96PV4 448 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 HTATIP2Q9BUP3 242 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 TNMDQ9H2S6 317 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 TRMT13Q9NUP7 481 aaKnown RBP23.06■■□□□ 1.28
RTCA-201ENST00000260563 TUBE1Q9UJT0 475 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 NOD1Q9Y239 953 aa23.06■■□□□ 1.28
RTCA-201ENST00000260563 ZBTB39O15060 712 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 TLR3O15455 904 aaKnown RBP23.05■■□□□ 1.28
RTCA-201ENST00000260563 B4GALT4O60513 344 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 PLCG1P19174 1290 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 PTGISQ16647 500 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 XKR9Q5GH70 373 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 ANKRD33Q7Z3H0 272 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 CEP57L1Q8IYX8 460 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 KCTD17Q8N5Z5 321 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 TRAPPC12Q8WVT3 735 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 CEP170P1Q96L14 293 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 PLIN2Q99541 437 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 SH2D3AQ9BRG2 576 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 CYP26B1Q9NR63 512 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 ANKEF1Q9NU02 776 aa23.05■■□□□ 1.28
RTCA-201ENST00000260563 TANC1Q9C0D5 1861 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 ZBTB42B2RXF5 422 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 SLFN14P0C7P3 912 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.282e-10■□□□□ 9.5
RTCA-201ENST00000260563 HIC1Q14526 733 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 TOX2Q96NM4 488 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 GZF1Q9H116 711 aaPredicted RBP23.04■■□□□ 1.28
RTCA-201ENST00000260563 DBR1Q9UK59 544 aaKnown RBP23.04■■□□□ 1.28
RTCA-201ENST00000260563 DNM3Q9UQ16 869 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 PPME1Q9Y570 386 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 MYH11P35749 1972 aa23.04■■□□□ 1.28
RTCA-201ENST00000260563 DCDC2CA8MYV0 355 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 RARRES1P49788 294 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 NPEPPSP55786 919 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms