RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZNF853P0CG23 659 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CYP2C9P11712 490 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MAP4P27816 1152 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 CHRNA5P30532 468 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 TIMM10P62072 90 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 TGM3Q08188 693 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MTFR1Q15390 333 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ZNF568Q3ZCX4 644 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SYCP2LQ5T4T6 812 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 FAM47EQ6ZV65 393 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 FRA10AC1Q70Z53 315 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 KBTBD3Q8NAB2 608 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ARMC2Q8NEN0 867 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CAPNS2Q96L46 248 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PNMA5Q96PV4 448 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MSTO1Q9BUK6 570 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 FAM107BQ9H098 131 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SP110Q9HB58 689 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MYOZ2Q9NPC6 264 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PCDHB4Q9Y5E5 795 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 FRMPD2Q68DX3 1309 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 INSRP06213 1382 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CRB1P82279 1406 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SPATA31D1Q6ZQQ2 1576 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 KIF3CO14782 793 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 KIAA0391O15091 583 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 CLDN3O15551 220 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 NCK2O43639 380 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 TLL1O43897 1013 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 LUC7L3O95232 432 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 SCP2P22307 547 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 AKT1P31749 480 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CTNNB1P35222 781 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 ETFBP38117 255 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 THPOP40225 353 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 AP1B1Q10567 949 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 MTMR1Q13613 665 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 MXD4Q14582 209 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 ZNF235Q14590 738 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 SETDB1Q15047 1291 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 TBC1D25Q3MII6 688 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 TDRD10Q5VZ19 366 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 MAP1SQ66K74 1059 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 KAZNQ674X7 775 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 JADE1Q6IE81 842 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 KLC3Q6P597 504 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 PSRC1Q6PGN9 363 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 ARFGAP2Q8N6H7 521 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 TMCO5AQ8N6Q1 288 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CCNYQ8ND76 341 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 UBLCP1Q8WVY7 318 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 PPP1R2P1Q96PQ5 205 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 ZBTB18Q99592 522 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 SENP6Q9GZR1 1112 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 INTS2Q9H0H0 1204 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 SLC32A1Q9H598 525 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 RPAP3Q9H6T3 665 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 COG4Q9H9E3 785 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 PALMDQ9NP74 551 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 BRPF3Q9ULD4 1205 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 PTCH1Q13635 1447 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CFAP43Q8NDM7 1665 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 ARHGAP10A1A4S6 786 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CES2O00748 559 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 GPC4O75487 556 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CTSEP14091 401 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CYP2C19P33261 490 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 GRIK1P39086 918 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CYP2J2P51589 502 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 STX1BP61266 288 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 STILQ15468 1287 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CCDC38Q502W7 563 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CCDC183Q5T5S1 534 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 OR6B2Q6IFH4 312 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 RWDD4Q6NW29 188 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 XRRA1Q6P2D8 792 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 BLIDQ8IZY5 108 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 STAG1Q8WVM7 1258 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 DNAJC1Q96KC8 554 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 SCYL1Q96KG9 808 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 HEXIM2Q96MH2 286 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 ZFP42Q96MM3 310 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 MRPL4Q9BYD3 311 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 IFIH1Q9BYX4 1025 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 RAVER2Q9HCJ3 691 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 VCX3AQ9NNX9 186 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 XPNPEP3Q9NQH7 507 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 GPN3Q9UHW5 284 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 TEKT2Q9UIF3 430 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 SERPINA10Q9UK55 444 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 KDM6AO15550 1401 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 TNS3Q68CZ2 1445 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 ADGRL3Q9HAR2 1447 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 TTC36A6NLP5 189 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 PRPSAP2O60256 369 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 LZTS3O60299 673 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 CIB2O75838 187 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CIAO1O76071 339 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 CKMP06732 381 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 GJB2P29033 226 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms