RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 WDR35Q9P2L0 1181 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 MAD1L1Q9Y6D9 718 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 HTR3EA5X5Y0 456 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 AREL1O15033 823 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 IL2RBP14784 551 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 OXCT1P55809 520 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PPARDQ03181 441 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 MCL1Q07820 350 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 BOLA3Q53S33 107 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 HSP90AA4PQ58FG1 418 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TNNI3KQ59H18 835 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 CCDC84Q86UT8 332 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 C8orf58Q8NAV2 365 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PPP1R14CQ8TAE6 165 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 SLC22A8Q8TCC7 542 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 AIDAQ96BJ3 306 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PHACTR3Q96KR7 559 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 MARCH7Q9H992 704 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 QPCTLQ9NXS2 382 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 NEURL4Q96JN8 1562 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DIP2BQ9P265 1576 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 RASGRF2O14827 1237 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 ZWINTO95229 277 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PGM3O95394 542 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 FKBP4Q02790 459 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 NFIAQ12857 509 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 KRR1Q13601 381 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TRIM14Q14142 442 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TTLL12Q14166 644 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 CFAP221Q4G0U5 840 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 RNF207Q6ZRF8 634 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 MDM1Q8TC05 714 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 ADNPQ9H2P0 1102 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 A0A087WZG4 1122 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TTC34A8MYJ7 566 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 ADAMTS2O95450 1211 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 NQO1P15559 274 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 ZNF132P52740 706 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 HELQQ8TDG4 1101 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 RASSF5Q8WWW0 418 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUSP9Q99956 384 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TIMMDC1Q9NPL8 285 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 FGFR1OP2Q9NVK5 253 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 C16orf96A6NNT2 1141 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 RNMTO43148 476 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 VAMP4O75379 141 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 ZNF202O95125 648 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 RAB14P61106 215 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 BLOC1S2Q6QNY1 142 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PASD1Q8IV76 773 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DCAF5Q96JK2 942 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TRPV5Q9NQA5 729 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 TBCCD1Q9NVR7 557 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 GIN1Q9NXP7 522 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 ARL2BPQ9Y2Y0 163 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 UBN2Q6ZU65 1347 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 A0A1B0GW55 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 CUTAO60888 179 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 GLRX3O76003 335 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4L2P0CJ85 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4L3P0CJ86 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4L4P0CJ87 422 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4L5P0CJ88 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4L6P0CJ89 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4L7P0CJ90 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 NPR1P16066 1061 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 SKIV2L2P42285 1042 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 MCCD1P59942 119 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PUDPQ08623 228 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 GRAMD1BQ3KR37 738 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 BEND6Q5SZJ8 279 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PLA2G4DQ86XP0 818 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 MRPL1Q9BYD6 325 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 PPCSQ9HAB8 311 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 DUX4Q9UBX2 424 aa7.23□□□□□ -1.25
PDGFRA-201ENST00000257290 USP6P35125 1406 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 QRICH2Q9H0J4 1663 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 HSMCR30P0CW71 290 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 CDC25CP30307 473 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 RASA2Q15283 850 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 RUNDC3AQ59EK9 446 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 CCDC51Q96ER9 411 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 UBAC1Q9BSL1 405 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ASAP1Q9ULH1 1129 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 KIF24Q5T7B8 1368 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 DLC1Q96QB1 1528 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 EIF3FO00303 357 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ATP9AO75110 1047 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 COBLO75128 1261 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 CTAGE3PQ8IX95 158 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ICA1LQ8NDH6 482 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PMM1Q92871 262 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PHF23Q9BUL5 403 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 EPC1Q9H2F5 836 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PSTPIP2Q9H939 334 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 USP40Q9NVE5 1235 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 KAT6BQ8WYB5 2073 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 SMIM31A0A1B0GVY4 71 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms