RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 UGCGQ16739 394 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 LARP1BQ659C4 914 aaKnown RBP9.6□□□□□ -0.87
TMEM258-201ENST00000257262 PSRC1Q6PGN9 363 aaPredicted RBP9.6□□□□□ -0.87
TMEM258-201ENST00000257262 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 OTOP2Q7RTS6 562 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 NOSTRINQ8IVI9 506 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 CKAP2LQ8IYA6 745 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 SLFN12Q8IYM2 578 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 SLC17A8Q8NDX2 589 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 ATP8B4Q8TF62 1192 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 RNPC3Q96LT9 517 aaKnown RBP9.6□□□□□ -0.87
TMEM258-201ENST00000257262 FTOQ9C0B1 505 aaKnown RBP eCLIP9.6□□□□□ -0.87
TMEM258-201ENST00000257262 TUBE1Q9UJT0 475 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 VAV3Q9UKW4 847 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 IGSF9BQ9UPX0 1349 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 SIP14410 1827 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 H3BQV1 296 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
TMEM258-201ENST00000257262 ZNF862O60290 1169 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 NBNO60934 754 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 PFKMP08237 780 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 KLRC1P26715 233 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 MCM7P33993 719 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 TXKP42681 527 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 PPP2R5CQ13362 524 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 DSG2Q14126 1118 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 CALCRLQ16602 461 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 ZNF484Q5JVG2 852 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 MCTP1Q6DN14 999 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 NCAPH2Q6IBW4 605 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 BANK1Q8NDB2 785 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 RDM1Q8NG50 284 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 DNAJB3Q8WWF6 145 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 HERVK_113Q902F9 699 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 MTMR9Q96QG7 549 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 OSBPL7Q9BZF2 842 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 TMEM60Q9H2L4 133 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 TTC12Q9H892 705 aaPredicted RBP9.59□□□□□ -0.87
TMEM258-201ENST00000257262 NRBP2Q9NSY0 501 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 CXXC1Q9P0U4 656 aaPredicted RBP9.59□□□□□ -0.87
TMEM258-201ENST00000257262 PCDHA12Q9UN75 941 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 PCDHA2Q9Y5H9 948 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 COL1A2P08123 1366 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
TMEM258-201ENST00000257262 ZBTB42B2RXF5 422 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 NEMFO60524 1076 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 CAND2O75155 1236 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 STBD1O95210 358 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 PARNO95453 639 aaKnown RBP9.58□□□□□ -0.88
TMEM258-201ENST00000257262 CHRNA1P02708 482 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 CXCL10P02778 98 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 OATP04181 439 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 CTSHP09668 335 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 ACTN1P12814 892 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 TOB1P50616 345 aaPredicted RBP9.58□□□□□ -0.88
TMEM258-201ENST00000257262 SPIRE1Q08AE8 756 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 NBR1Q14596 966 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 EPHA7Q15375 998 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 TCTN1Q2MV58 587 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 FAM26DQ5JW98 314 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 TTC38Q5R3I4 469 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 TAF2Q6P1X5 1199 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 RSPH3Q86UC2 560 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.88
TMEM258-201ENST00000257262 SNX21Q969T3 373 aa9.58□□□□□ -0.88
TMEM258-201ENST00000257262 FAM49AQ9H0Q0 323 aaPredicted RBP9.58□□□□□ -0.88
TMEM258-201ENST00000257262 NOL7Q9UMY1 257 aaKnown RBP9.58□□□□□ -0.88
TMEM258-201ENST00000257262 GBF1Q92538 1859 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 LOXHD1Q8IVV2 1947 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 SMIM35A0A1B0GVV1 85 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 TMEM150BA6NC51 233 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 GRXCR1A8MXD5 290 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 P4HBP07237 508 aaKnown RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 TECP42680 631 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 QARSP47897 775 aaKnown RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 TRAPPC10P48553 1259 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 PSMC5P62195 406 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 PRKCEQ02156 737 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 MGAT3Q09327 533 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 TMEM62Q0P6H9 643 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 ORC2Q13416 577 aaPredicted RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 XKR3Q5GH77 459 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 FAM109BQ6ICB4 259 aaPredicted RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 CNKSR3Q6P9H4 555 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 RPAINQ86UA6 219 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 C4orf32Q8N8J7 132 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 PTCD2Q8WV60 388 aaKnown RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 INTS4Q96HW7 963 aaKnown RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 DYDC2Q96IM9 177 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 SH2D3AQ9BRG2 576 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 NIFKQ9BYG3 293 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms