RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ADGRF4Q8IZF3 695 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 ENOX1Q8TC92 643 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TMEM47Q9BQJ4 181 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 CXCR5P32302 372 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 DR1Q01658 176 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 KRT33BQ14525 404 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 ZNF699Q32M78 642 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TTC30AQ86WT1 665 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 SRRM1Q8IYB3 904 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 BEST2Q8NFU1 509 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 LY9Q9HBG7 655 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 PAMP19021 973 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 ETF1P62495 437 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 CUL4AQ13619 759 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TTLL4Q14679 1199 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 ZNF568Q3ZCX4 644 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 POLR3FQ9H1D9 316 aaPredicted RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 NDST4Q9H3R1 872 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 PDE11AQ9HCR9 933 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TLK1Q9UKI8 766 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 RCOR1Q9UKL0 485 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 FAN1Q9Y2M0 1017 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 GDAQ9Y2T3 454 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 A0A087WWV3 80 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 LRRD1A4D1F6 860 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TOM1L1O75674 476 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TSPY1Q01534 308 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 COASYQ13057 564 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 RCN2Q14257 317 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 NDUFAF2Q8N183 169 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 GBP7Q8N8V2 638 aaPredicted RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 FAF2Q96CS3 445 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 BHMT2Q9H2M3 363 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 TBC1D22BQ9NU19 505 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 INPP5FQ9Y2H2 1132 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 SEC31AO94979 1220 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ZBTB7AO95365 584 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ZBED1O96006 694 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 HOXD10P28358 340 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 PLTPP55058 493 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ZBED6P86452 979 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ZNF667Q5HYK9 610 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SFR1Q86XK3 245 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 INTS9Q9NV88 658 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ATP8A1Q9Y2Q0 1164 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 OPHN1O60890 802 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 GPC4O75487 556 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 HSPA6P17066 643 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SESN3P58005 492 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ANKRD20A4Q4UJ75 823 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ANKRD20A8PQ5CZ79 823 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ANKRD20A2Q5SQ80 823 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ANKRD20A1Q5TYW2 823 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 BZW1Q7L1Q6 419 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 PDZD8Q8NEN9 1154 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 KIAA1586Q9HCI6 787 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 OLA1Q9NTK5 396 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 CEP72Q9P209 647 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SFNP31947 248 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 KRT31Q15323 416 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 TRIM68Q6AZZ1 485 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 RHPN2Q8IUC4 686 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 GDAP1Q8TB36 358 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 CEP95Q96GE4 821 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 GBP5Q96PP8 586 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 TACO1Q9BSH4 297 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 C2orf40Q9H1Z8 148 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 ZNF521Q96K83 1311 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SUN1O94901 812 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 MT-ND3P03897 115 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 PRDX5P30044 214 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 KLC3Q6P597 504 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 CFAP61Q8NHU2 1237 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 NSUN6Q8TEA1 469 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 NUDCD1Q96RS6 583 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 AP1M1Q9BXS5 423 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 FNDC3AQ9Y2H6 1198 aaKnown RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SLC16A4O15374 487 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 TJP3O95049 919 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 PPARGP37231 505 aaPredicted RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 EPHA10Q5JZY3 1008 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 RNF219Q5W0B1 726 aaPredicted RBP9.36□□□□□ -0.91
PTCD3-201ENST00000254630 KCTD16Q68DU8 428 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SPOPLQ6IQ16 392 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 CYP4F22Q6NT55 531 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SP8Q8IXZ3 490 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 RABGGTAQ92696 567 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 SPATA33Q96N06 139 aa9.36□□□□□ -0.91
PTCD3-201ENST00000254630 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms