RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PPP1R2P3Q6NXS1 205 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 ALKBH5Q6P6C2 394 aaKnown RBP14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 MAP4K1Q92918 833 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 CARD9Q9H257 536 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 PCCAP05165 728 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 PDE6AP16499 860 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCNE1P24864 410 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 SMYD4Q8IYR2 804 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 FANCBQ8NB91 859 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 TTC25Q96NG3 672 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCDC134Q9H6E4 229 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 GPCPD1Q9NPB8 672 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 PKD2L2Q9NZM6 624 aa14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 IPO11Q9UI26 975 aaKnown RBP14.1□□□□□ -0.15
PCDHGA3-201ENST00000253812 hCG_1642624A0A1W2PR95 340 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MIF4GDA9UHW6 222 aaKnown RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 H3BRJ5 948 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 P4HA1P13674 534 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 TPP2P29144 1249 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MORF4L2Q15014 288 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 GALNT17Q6IS24 598 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 TRIM59Q8IWR1 403 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 LSG1Q9H089 658 aaKnown RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 ETAA1Q9NY74 926 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 A0A0D9SFI3 127 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 ACAD11Q709F0 780 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 SIKE1Q9BRV8 207 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MLXIPLQ9NP71 852 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 DNAJC17Q9NVM6 304 aaKnown RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 PRDM4Q9UKN5 801 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCT8L1PA6NM43 557 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 AFPP02771 609 aaKnown RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 VHLP40337 213 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 TECP42680 631 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MB21D1Q8N884 522 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 OSBPL3Q9H4L5 887 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 TMOD4Q9NZQ9 345 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 ADAMTS1Q9UHI8 967 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 TEKT2Q9UIF3 430 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 TRPM1Q7Z4N2 1603 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 SYNGAP1Q96PV0 1343 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 KRT38O76015 456 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 APBA3O96018 575 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 DNAL1Q4LDG9 190 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCDC80Q76M96 950 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 MKL2Q9ULH7 1088 aa14.09□□□□□ -0.15
PCDHGA3-201ENST00000253812 ESYT3A0FGR9 886 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 MFAP3P55082 362 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 HORMAD1Q86X24 394 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 RHOT2Q8IXI1 618 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 ZNF483Q8TF39 744 aaPredicted RBP14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 PCDHA12Q9UN75 941 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 NOC2LQ9Y3T9 749 aaKnown RBP14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 SP4Q02446 784 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 ADCK1Q86TW2 530 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 SUGP1Q8IWZ8 645 aaKnown RBP14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 PUS3Q9BZE2 481 aaKnown RBP14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 WWP1Q9H0M0 922 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 GINM1Q9NU53 330 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 PKD2L1Q9P0L9 805 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 NBPF26B4DH59 902 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 NR2F2P24468 414 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 MARK3P27448 753 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 INAQ16352 499 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 RCSD1Q6JBY9 416 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 FAM178BQ8IXR5 827 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 NBPF15Q8N660 670 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 TUBGCP3Q96CW5 907 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 COQ7Q99807 217 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 COPRSQ9NQ92 184 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 UBAP1Q9NZ09 502 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 ANKARQ7Z5J8 1434 aa14.08□□□□□ -0.16
PCDHGA3-201ENST00000253812 C16orf96A6NNT2 1141 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 NPR1P16066 1061 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 KCNQ4P56696 695 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 LRRC14Q15048 493 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 TRIP13Q15645 432 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 NDST4Q9H3R1 872 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 SLITRK6Q9H5Y7 841 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 GREM2Q9H772 168 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 MRPL47Q9HD33 250 aaKnown RBP14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 SENP1Q9P0U3 644 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 STAP2Q9UGK3 403 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 CARMIL3Q8ND23 1372 aa14.07□□□□□ -0.16
PCDHGA3-201ENST00000253812 SMCO2A6NFE2 343 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms