RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SPAG5Q96R06 1193 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 EPC1Q9H2F5 836 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 TBC1D22BQ9NU19 505 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 COL20A1Q9P218 1284 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 JRKLQ9Y4A0 524 aa16.6■□□□□ 0.25
DDX49-201ENST00000247003 AKAP3O75969 853 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 NMT1P30419 496 aaKnown RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 PSMC2P35998 433 aaKnown RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 ZNF131P52739 623 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 SYTL5Q8TDW5 730 aaPredicted RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 UBIAD1Q9Y5Z9 338 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 CLIC2O15247 247 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 GFPT1Q06210 699 aaPredicted RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 KLHL30Q0D2K2 578 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 HGSNATQ68CP4 663 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 CC2D1AQ6P1N0 951 aaPredicted RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 FAM186BQ8IYM0 893 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 SGIP1Q9BQI5 828 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 GANQ9H2C0 597 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 AGO4Q9HCK5 861 aaKnown RBP16.59■□□□□ 0.25
DDX49-201ENST00000247003 POLD4Q9HCU8 107 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 FRMD4BQ9Y2L6 1034 aa16.59■□□□□ 0.25
DDX49-201ENST00000247003 ZMYM2Q9UBW7 1377 aa16.58■□□□□ 0.25
DDX49-201ENST00000247003 MYH11P35749 1972 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 RBAK-RBAKDNI3L0D1 243 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 PJA2O43164 708 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 ZRANB2O95218 330 aaKnown RBP eCLIP16.58■□□□□ 0.24
DDX49-201ENST00000247003 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 RASSF7Q02833 373 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 ALCAMQ13740 583 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 ASTE1Q2TB18 679 aaPredicted RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 MUM1L1Q5H9M0 696 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 FAM133AQ8N9E0 248 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 IL31RAQ8NI17 732 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 NOX5Q96PH1 765 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 AIPL1Q9NZN9 384 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 LARSQ9P2J5 1176 aaKnown RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 WRAP73Q9P2S5 460 aaPredicted RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 CD2APQ9Y5K6 639 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 BZW2Q9Y6E2 419 aaKnown RBP16.58■□□□□ 0.24
DDX49-201ENST00000247003 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
DDX49-201ENST00000247003 FZD9O00144 591 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 ZBTB39O15060 712 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 HIP1RO75146 1068 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 MCM3P25205 808 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 ARID5AQ03989 594 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 SPP2Q13103 211 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 DGKZQ13574 1117 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 PGM5Q15124 567 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 ZC2HC1CQ53FD0 456 aaPredicted RBP16.57■□□□□ 0.24
DDX49-201ENST00000247003 NBPF12Q5TAG4 269 aaPredicted RBP16.57■□□□□ 0.24
DDX49-201ENST00000247003 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 PADI6Q6TGC4 694 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 ZNF720Q7Z2F6 126 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 GPIHBP1Q8IV16 184 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 WRNIP1Q96S55 665 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX49-201ENST00000247003 GCNT4Q9P109 453 aa16.57■□□□□ 0.24
DDX49-201ENST00000247003 DBR1Q9UK59 544 aaKnown RBP16.57■□□□□ 0.24
DDX49-201ENST00000247003 ASTN2O75129 1339 aaPredicted RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 GTPBP10A4D1E9 387 aaKnown RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 K7ENM7 598 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 TGFB1I1O43294 461 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 MOCS3O95396 460 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 MYCLP12524 364 aaPredicted RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 UCHL3P15374 230 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 QARSP47897 775 aaKnown RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 JAK3P52333 1124 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 NAP1L1P55209 391 aaKnown RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 BACE1P56817 501 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 KCNA1Q09470 495 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 CCDC70Q6NSX1 233 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 ZNF280CQ8ND82 737 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 SLC35C1Q96A29 364 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 CAPZA3Q96KX2 299 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 RMDN3Q96TC7 470 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 ANKZF1Q9H8Y5 726 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 FHOD1Q9Y613 1164 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 VWA5AO00534 786 aa16.56■□□□□ 0.24
DDX49-201ENST00000247003 SEC31AO94979 1220 aaKnown RBP16.56■□□□□ 0.24
DDX49-201ENST00000247003 RHOXF2BP0C7M4 288 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms