RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 CDKAL1Q5VV42 579 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 CYFIP2Q96F07 1278 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 BICD1Q96G01 975 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 NUCKS1Q9H1E3 243 aaKnown RBP12.52□□□□□ -0.41
SOX9-201ENST00000245479 SYF2O95926 243 aaKnown RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 FAM107AO95990 144 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 TMOD1P28289 359 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 SMTNP53814 917 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 PPP2R2AP63151 447 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 DDR1Q08345 913 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 PTGISQ16647 500 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 MYCBPAPQ8TBZ2 947 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 ACER1Q8TDN7 264 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 PALM3A6NDB9 673 aaPredicted RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 GAS7O60861 476 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 XRCC5P13010 732 aaKnown RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 ATP5DP30049 168 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 HERVK_113P62684 666 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 DRP2Q13474 957 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 EEPD1Q7L9B9 569 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 SH3GL3Q99963 347 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 SERPINA10Q9UK55 444 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 COL1A1P02452 1464 aaPredicted RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 MMEP08473 750 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 MYBP10242 640 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 CETN2P41208 172 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 CASP4P49662 377 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 CRYMQ14894 314 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 ODR4Q5SWX8 454 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
SOX9-201ENST00000245479 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 PLVAPQ9BX97 442 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
SOX9-201ENST00000245479 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 BBOX1O75936 387 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 DLATP10515 647 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 EIF2AK2P19525 551 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 TM4SF1P30408 202 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 HSPA1LP34931 641 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 PLTPP55058 493 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 TTI2Q6NXR4 508 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 CAPN12Q6ZSI9 719 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 RAB3IPQ96QF0 476 aaPredicted RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 CNOT10Q9H9A5 744 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 LIMA1Q9UHB6 759 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 CHD2O14647 1828 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 ITIH6Q6UXX5 1313 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 PHF20L1A8MW92 1017 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 PDE2AO00408 941 aaPredicted RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 BIRC3Q13489 604 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 CCDC105Q8IYK2 499 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 GIMAP8Q8ND71 665 aaPredicted RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 IRAK4Q9NWZ3 460 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 PGRMC1O00264 195 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 ZBTB5O15062 677 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 DIAPH2O60879 1101 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
SOX9-201ENST00000245479 SLMAPQ14BN4 828 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 MCUR1Q96AQ8 359 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 HOOK2Q96ED9 719 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 RBM12Q9NTZ6 932 aaKnown RBP12.5□□□□□ -0.41
SOX9-201ENST00000245479 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 10.1
SOX9-201ENST00000245479 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 PTPN22Q9Y2R2 807 aa12.5□□□□□ -0.41
SOX9-201ENST00000245479 TAF1P21675 1872 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 HS2ST1Q7LGA3 356 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 RAD54LQ92698 747 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 ZMYND12Q9H0C1 365 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 KDM3BQ7LBC6 1761 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 MYBL2P10244 700 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 MTM1Q13496 603 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 EXOC3L4Q17RC7 722 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 SEL1L2Q5TEA6 688 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 LMBRD2Q68DH5 695 aaPredicted RBP12.49□□□□□ -0.41
SOX9-201ENST00000245479 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
SOX9-201ENST00000245479 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 SEC16BQ96JE7 1060 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 PSMD1Q99460 953 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 DDX47Q9H0S4 455 aaKnown RBP12.49□□□□□ -0.41
SOX9-201ENST00000245479 VCPKMTQ9H867 229 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms