RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 VAC14Q08AM6 782 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 MTA1Q13330 715 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 PPIGQ13427 754 aaKnown RBP eCLIP10.39□□□□□ -0.75
TGFB3-201ENST00000238682 LETM2Q2VYF4 491 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 EARS2Q5JPH6 523 aaKnown RBP10.39□□□□□ -0.75
TGFB3-201ENST00000238682 HYIQ5T013 277 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 ARHGEF16Q5VV41 709 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 USP17L6PQ6QN14 398 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 VSIG10LQ86VR7 867 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 CCDC39Q9UFE4 941 aa10.39□□□□□ -0.75
TGFB3-201ENST00000238682 MYH7BA7E2Y1 1941 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 LOXHD1Q8IVV2 1947 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 DKC1O60832 514 aaKnown RBP eCLIP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 PFKMP08237 780 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 PGM5Q15124 567 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 CT47A1Q5JQC4 288 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 CCDC183Q5T5S1 534 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 CCDC181Q5TID7 509 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 CCSAPQ6IQ19 270 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 IGSF22Q8N9C0 903 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 SLC43A3Q8NBI5 491 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 RNF214Q8ND24 703 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 GLT1D1Q96MS3 346 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 AP5M1Q9H0R1 490 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 IGLV3-22A0A075B6J6 115 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 A0A1W2PQ45 241 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 A0A1W2PQY0 241 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 PPP1R12AO14974 1030 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 SFNP31947 248 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 RFC2P35250 354 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 ZNF76P36508 570 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 CBX1P83916 185 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 BAATQ14032 418 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 STXBP2Q15833 593 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 C4orf46Q504U0 113 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 HAUS3Q68CZ6 603 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 FMNL3Q8IVF7 1028 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 ETNPPLQ8TBG4 499 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 RNF217Q8TC41 542 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-201ENST00000238682 RMDN3Q96TC7 470 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 STK17AQ9UEE5 414 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 PCDHB13Q9Y5F0 798 aa10.38□□□□□ -0.75
TGFB3-201ENST00000238682 MCM7P33993 719 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 ACLYP53396 1101 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 SNAP25P60880 206 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 PPP2R5CQ13362 524 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 ZNF174Q15697 407 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 SWT1Q5T5J6 900 aaKnown RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 RINLQ6ZS11 566 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 KATNBL1Q9H079 304 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 FEZ2Q9UHY8 353 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 RIPK3Q9Y572 518 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 LCTP09848 1927 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 TCHHQ07283 1943 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 CAVIN2O95810 425 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 SSTR3P32745 418 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 PSRC1Q6PGN9 363 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 NSMFQ6X4W1 530 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 SLC30A10Q6XR72 485 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 RAVER1Q8IY67 606 aaKnown RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 RASGRP4Q8TDF6 673 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 PGBD1Q96JS3 809 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 FAM161BQ96MY7 647 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 RPS6KC1Q96S38 1066 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 STARD7Q9NQZ5 370 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 ZMYND8Q9ULU4 1186 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-201ENST00000238682 COL4A3BPQ9Y5P4 624 aa10.37□□□□□ -0.75
TGFB3-201ENST00000238682 ABCB7O75027 752 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 ATG7O95352 703 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 NR3C2P08235 984 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 VAMP1P23763 118 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 ADCYAP1R1P41586 468 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 CPT1AP50416 773 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 CDK7P50613 346 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 GYS2P54840 703 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 KRT76Q01546 638 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 ENGASEQ8NFI3 743 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 LENG9Q96B70 501 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 POLR3CQ9BUI4 534 aaPredicted RBP10.36□□□□□ -0.75
TGFB3-201ENST00000238682 TEKT3Q9BXF9 490 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 TUFT1Q9NNX1 390 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
TGFB3-201ENST00000238682 ARVCFO00192 962 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 EDIL3O43854 480 aa10.36□□□□□ -0.75
TGFB3-201ENST00000238682 SUPT20HL2P0C7V6 817 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms