RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 TSEN34Q9BSV6 310 aaKnown RBP9.6□□□□□ -0.87
VPS4B-201ENST00000238497 KATNBL1Q9H079 304 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 PDLIM7Q9NR12 457 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 CDC25BP30305 580 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 CPT1AP50416 773 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 ITGA7Q13683 1181 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 TMEM266Q2M3C6 531 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 SPATA1Q5VX52 437 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 VSTM4Q8IW00 320 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 TDHQ8IZJ6 230 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 AFG1LQ8WV93 481 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 PARP14Q460N5 1801 aa9.6□□□□□ -0.87
VPS4B-201ENST00000238497 TRIM43BA6NCK2 446 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 SLC37A4O43826 429 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 PRR16Q569H4 304 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 TOGARAM2Q6ZUX3 1019 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 DHX37Q8IY37 1157 aaKnown RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 CSGALNACT2Q8N6G5 542 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 ENOX1Q8TC92 643 aaKnown RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 TRIM43Q96BQ3 446 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 GSDMAQ96QA5 445 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 RIOX1Q9H6W3 641 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 PXMP2Q9NR77 195 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 INTS13Q9NVM9 706 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 GNEQ9Y223 722 aaKnown RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 PLXNA1Q9UIW2 1896 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 ARVCFO00192 962 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 LONP1P36776 959 aaKnown RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 CCL23P55773 120 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 KRT79Q5XKE5 535 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 TNFRSF25Q93038 417 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 TRPV6Q9H1D0 765 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 EPC1Q9H2F5 836 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 MLXIPQ9HAP2 919 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 IMPACTQ9P2X3 320 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 A0A0U1RQJ8 604 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 KCNJ18B7U540 433 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 AKR1B15C9JRZ8 316 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 PSMA7O14818 248 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 ARIH2O95376 493 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 DNA2P51530 1060 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 PMS1P54277 932 aaKnown RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 KCNJ12Q14500 433 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 ATRIPQ8WXE1 791 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 LZTS2Q9BRK4 669 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 BMP2KQ9NSY1 1161 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-201ENST00000238497 TFR2Q9UP52 801 aa9.59□□□□□ -0.87
VPS4B-201ENST00000238497 SPDYE3A6NKU9 549 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 EIF3JO75822 258 aaKnown RBP9.58□□□□□ -0.88
VPS4B-201ENST00000238497 GH1P01241 217 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 TRIM21P19474 475 aaKnown RBP9.58□□□□□ -0.88
VPS4B-201ENST00000238497 CYP2C18P33260 490 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 KRT9P35527 623 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 KRT31Q15323 416 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 ELF2Q15723 593 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 MAEAQ7L5Y9 396 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 IL31RAQ8NI17 732 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 PDCD2LQ9BRP1 358 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 DDX25Q9UHL0 483 aaKnown RBP9.58□□□□□ -0.88
VPS4B-201ENST00000238497 PCDHA12Q9UN75 941 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 PPP1R3GB7ZBB8 358 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 DDX39AO00148 427 aaKnown RBP9.58□□□□□ -0.88
VPS4B-201ENST00000238497 NOP56O00567 594 aaKnown RBP9.58□□□□□ -0.88
VPS4B-201ENST00000238497 CABYRO75952 493 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 ACRP10323 421 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 CYP2C9P11712 490 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 CCND2P30279 289 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 TRAPPC10P48553 1259 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 ARID5AQ03989 594 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 PDE4CQ08493 712 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 STK4Q13043 487 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 ERCC6LQ2NKX8 1250 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 ARHGAP29Q52LW3 1261 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 NCAPH2Q6IBW4 605 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 SV2BQ7L1I2 683 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 RGS22Q8NE09 1264 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 HINFPQ9BQA5 517 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 BPIFA3Q9BQP9 254 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 MROH7Q68CQ1 1323 aa9.58□□□□□ -0.88
VPS4B-201ENST00000238497 GGPS1O95749 300 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 SARSP49591 514 aaKnown RBP9.57□□□□□ -0.88
VPS4B-201ENST00000238497 FAAP100Q0VG06 881 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 C9orf50Q5SZB4 431 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 TEX35Q5T0J7 233 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 RNPC3Q96LT9 517 aaKnown RBP9.57□□□□□ -0.88
VPS4B-201ENST00000238497 IWS1Q96ST2 819 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 MTG1Q9BT17 334 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-201ENST00000238497 SPZ1Q9BXG8 430 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 ZMYND12Q9H0C1 365 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 MMRN2Q9H8L6 949 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 TRMT13Q9NUP7 481 aaKnown RBP9.57□□□□□ -0.88
VPS4B-201ENST00000238497 KIAA1024Q9UPX6 916 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 ZNF236Q9UL36 1845 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 SOX1O00570 391 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-201ENST00000238497 CST5P28325 142 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-201ENST00000238497 TBC1D8BQ0IIM8 1120 aa9.57□□□□□ -0.88
VPS4B-201ENST00000238497 SHHQ15465 462 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms