RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 APBA1Q02410 837 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 KLHL30Q0D2K2 578 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 RAPGEF1Q13905 1077 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 ASIC2Q16515 512 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 MYCT1Q8N699 235 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 SAMD3Q8N6K7 520 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 RUBCNQ92622 972 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 LPAR1Q92633 364 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 TLR10Q9BXR5 811 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 BCAS3Q9H6U6 928 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 MAP3K20Q9NYL2 800 aaKnown RBP17.74■□□□□ 0.43
UBE3D-201ENST00000237186 RNF14Q9UBS8 474 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 ZMYM2Q9UBW7 1377 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 IPO5O00410 1097 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 INPP5BP32019 993 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 CASP4P49662 377 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 KCNA1Q09470 495 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 GBP6Q6ZN66 633 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 FAM133AQ8N9E0 248 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 PRPF38AQ8NAV1 312 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 CAGE1Q8TC20 777 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 WRAP73Q9P2S5 460 aaPredicted RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 A0A087X0T9 212 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 SFI1A8K8P3 1242 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 ZBTB39O15060 712 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 WDR46O15213 610 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 CHMP2AO43633 222 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 FAM228BP0C875 321 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 PSMC2P35998 433 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 UBXN2AP68543 259 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 GPS2Q13227 327 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 CASP8Q14790 479 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 R3HDM1Q15032 1099 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 ZYXQ15942 572 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 DALRD3Q5D0E6 543 aaKnown RBP17.73■□□□□ 0.43
UBE3D-201ENST00000237186 SLC30A10Q6XR72 485 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 STXBP4Q6ZWJ1 553 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 COG1Q8WTW3 980 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 CLEC4DQ8WXI8 215 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 STRA6Q9BX79 667 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 VIPAS39Q9H9C1 493 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 DMAC2Q9NW81 257 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 ATP8B3O60423 1300 aa17.73■□□□□ 0.43
UBE3D-201ENST00000237186 ATAD5Q96QE3 1844 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 EIF3JO75822 258 aaKnown RBP17.72■□□□□ 0.43
UBE3D-201ENST00000237186 ACTN1P12814 892 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 NMT1P30419 496 aaKnown RBP17.72■□□□□ 0.43
UBE3D-201ENST00000237186 MAP9Q49MG5 647 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 MCF2L2Q86YR7 1114 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 SPATA4Q8NEY3 305 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 TMEM174Q8WUU8 243 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 KIAA1683Q9H0B3 1180 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 MYOZ2Q9NPC6 264 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 ADAMTS1Q9UHI8 967 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 PCDHB13Q9Y5F0 798 aa17.72■□□□□ 0.43
UBE3D-201ENST00000237186 ITGB5P18084 799 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 JAM2P57087 298 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 MYBPC2Q14324 1141 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 GOLGA5Q8TBA6 731 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 LXNQ9BS40 222 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 POLD4Q9HCU8 107 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 SIX2Q9NPC8 291 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
UBE3D-201ENST00000237186 CLIC2O15247 247 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 DHX15O43143 795 aaKnown RBP17.71■□□□□ 0.43
UBE3D-201ENST00000237186 PTK2Q05397 1052 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
UBE3D-201ENST00000237186 ZNF771Q7L3S4 317 aaPredicted RBP17.71■□□□□ 0.43
UBE3D-201ENST00000237186 SLC9A9Q8IVB4 645 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 FAM178BQ8IXR5 827 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 TEPSINQ96N21 525 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 SPAG5Q96R06 1193 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 SUGCTQ9HAC7 445 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 KCNH7Q9NS40 1196 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 COL20A1Q9P218 1284 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 NENFQ9UMX5 172 aa17.71■□□□□ 0.43
UBE3D-201ENST00000237186 PPP1R12BO60237 982 aaPredicted RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 PPP1R37O75864 691 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 MAPTP10636 758 aaKnown RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 KLRC1P26715 233 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 ZNF280AP59817 542 aaPredicted RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 RASA3Q14644 834 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 ZC2HC1CQ53FD0 456 aaPredicted RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 DCAF17Q5H9S7 520 aaPredicted RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 CCDC70Q6NSX1 233 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 HS2ST1Q7LGA3 356 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 ZNF571Q7Z3V5 609 aaPredicted RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 GPIHBP1Q8IV16 184 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 FAM186BQ8IYM0 893 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 RBM46Q8TBY0 533 aaKnown RBP17.7■□□□□ 0.42
UBE3D-201ENST00000237186 PDE11AQ9HCR9 933 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms