RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 RALYLQ86SE5 291 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 SNRNP27Q8WVK2 155 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 PCMTD1Q96MG8 357 aaPredicted RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 FAM217BQ9NTX9 383 aaPredicted RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 PAG1Q9NWQ8 432 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 KLHL14Q9P2G3 628 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 PACSIN2Q9UNF0 486 aaPredicted RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 R3HDM2Q9Y2K5 976 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 POTEJP0CG39 1038 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 SLC1A4P43007 532 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 KHDC1Q4VXA5 237 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 C6orf118Q5T5N4 469 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 MARK2Q7KZI7 788 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 SLC7A6OSQ96CW6 309 aaPredicted RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 ABHD8Q96I13 439 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 ASCC2Q9H1I8 757 aaPredicted RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 STK24Q9Y6E0 443 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 TLDC2A0PJX2 215 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 HTR3EA5X5Y0 456 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 RGL2O15211 777 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 CCDC6Q16204 474 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 WDR72Q3MJ13 1102 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 PDXDC2PQ6P474 469 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 LRRC74BQ6ZQY2 392 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 TUBGCP5Q96RT8 1024 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 SUCLA2Q9P2R7 463 aaPredicted RBP14.07□□□□□ -0.16
MSH2-201ENST00000233146 KCNJ14Q9UNX9 436 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 A6NJR5 290 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 ALDH2P05091 517 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 EPHB2P29323 1055 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 AP1B1Q10567 949 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 CGB2Q6NT52 195 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 KSR2Q6VAB6 950 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 MPP4Q96JB8 637 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 MYLK2Q9H1R3 596 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 PABPC3Q9H361 631 aaKnown RBP14.07□□□□□ -0.16
MSH2-201ENST00000233146 RNF113AO15541 343 aaKnown RBP14.07□□□□□ -0.16
MSH2-201ENST00000233146 EYA4O95677 639 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 RPN1P04843 607 aaKnown RBP14.07□□□□□ -0.16
MSH2-201ENST00000233146 EIF4A1P60842 406 aaKnown RBP14.07□□□□□ -0.16
MSH2-201ENST00000233146 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
MSH2-201ENST00000233146 NR5A1Q13285 461 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 NAB2Q15742 525 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 TMEM53Q6P2H8 277 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 MAP7D3Q8IWC1 876 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 HAO1Q9UJM8 370 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 ZNF148Q9UQR1 794 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 DIP2AQ14689 1571 aa14.07□□□□□ -0.16
MSH2-201ENST00000233146 PASKQ96RG2 1323 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 RBAK-RBAKDNI3L0D1 243 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 HGSO14964 777 aaPredicted RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 ASMTLO95671 621 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 FGAP02671 866 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 TROVE2P10155 538 aaKnown RBP eCLIP14.06□□□□□ -0.16
MSH2-201ENST00000233146 SSRP1Q08945 709 aaKnown RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 FMO2Q99518 471 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 SLC26A6Q9BXS9 759 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 DDX47Q9H0S4 455 aaKnown RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 ARHGEF38Q9NXL2 777 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 PNPLA7Q6ZV29 1317 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 BIRC5O15392 142 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 SLC34A1Q06495 639 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 CERKLQ49MI3 558 aaPredicted RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 ZSCAN29Q8IWY8 852 aaPredicted RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 CYP4X1Q8N118 509 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 RIBC1Q8N443 379 aaPredicted RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 NAP1L3Q99457 506 aaPredicted RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 ZNF184Q99676 751 aaPredicted RBP14.06□□□□□ -0.16
MSH2-201ENST00000233146 ZMYND12Q9H0C1 365 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 TLE6Q9H808 572 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 TMEM131LA2VDJ0 1609 aa14.06□□□□□ -0.16
MSH2-201ENST00000233146 TRAFD1O14545 582 aaPredicted RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 TARSP26639 723 aaKnown RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 SERPINB3P29508 390 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 CROCCP2Q86T23 111 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 PDCD7Q8N8D1 485 aaKnown RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 NEK9Q8TD19 979 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 DIS3LQ8TF46 1054 aaKnown RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 WASF1Q92558 559 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 SIKE1Q9BRV8 207 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 TMEM109Q9BVC6 243 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 DISP2A7MBM2 1401 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 CCDC188H7C350 402 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 GUCY1A2P33402 732 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 IGHMBP2P38935 993 aaKnown RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 R3HDM1Q15032 1099 aaKnown RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 LRRC14Q15048 493 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 RCN1Q15293 331 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 TTI2Q6NXR4 508 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 C4orf50Q6ZRC1 276 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 FAM47EQ6ZV65 393 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms