RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 MSTO1Q9BUK6 570 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 SRP68Q9UHB9 627 aaKnown RBP14.37□□□□□ -0.11
NEK4-201ENST00000233027 CCDC195A0A1B0GUA6 201 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 PP2D1A8MPX8 630 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 SKIP12755 728 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
NEK4-201ENST00000233027 TUBB6Q9BUF5 446 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 PRR36Q9H6K5 1346 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 KCTD2Q14681 263 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 RAD54LQ92698 747 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 FAM81BQ96LP2 452 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 EFCAB6Q5THR3 1501 aa14.37□□□□□ -0.11
NEK4-201ENST00000233027 RASA4BC9J798 803 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 RASA4O43374 803 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 GRAMD1BQ3KR37 738 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 TRMT10CQ7L0Y3 403 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 F5H423 210 aaPredicted RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 NVLO15381 856 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 COASYQ13057 564 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 NKX1-1Q15270 411 aaPredicted RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 GLE1Q53GS7 698 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 KRT80Q6KB66 452 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 FAM196AQ6ZSG2 479 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 DCPSQ96C86 337 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 LPXNO60711 386 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 ATP1A1P05023 1023 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 LCA5Q86VQ0 697 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 ERICH1Q86X53 443 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 CCDC138Q96M89 665 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 NLRP1Q9C000 1473 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 H7C1W4 665 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 PSAPP07602 524 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 PMS2P54278 862 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 ZC3H18Q86VM9 953 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 SYT2Q8N9I0 419 aaPredicted RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 OSBPL5Q9H0X9 879 aaPredicted RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 TTC7AQ9ULT0 858 aaPredicted RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 MTF1Q14872 753 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 ATG16L1Q676U5 607 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 CNOT8Q9UFF9 292 aaKnown RBP14.36□□□□□ -0.11
NEK4-201ENST00000233027 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
NEK4-201ENST00000233027 CCDC188H7C350 402 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 IGKV5-2P06315 115 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 ACTN3Q08043 901 aaPredicted RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 EPM2AIP1Q7L775 607 aaPredicted RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 SYNE4Q8N205 404 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.35□□□□□ -0.11
NEK4-201ENST00000233027 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 KRT82Q9NSB4 513 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 GCLMP48507 274 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 ARPP19P56211 112 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 TMPRSS15P98073 1019 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 ORC6Q9Y5N6 252 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 MRFAP1Q9Y605 127 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 GOLGA8CPA6NN73 597 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PODXLO00592 558 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 RAD17O75943 681 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 CSPG5O95196 566 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 NR3C1P04150 777 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 ATXN8OSP0DMR3 200 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 CACNB3P54284 484 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 SRRM1Q8IYB3 904 aaKnown RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 FGD4Q96M96 766 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PDHA1P08559 390 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 ESRRGP62508 458 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 LRRC14Q15048 493 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PDIK1LQ8N165 341 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PIGBQ92521 554 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 NOP53Q9NZM5 478 aaKnown RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 CPSF1Q10570 1443 aaKnown RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 TJP3O95049 919 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 CRLF3Q8IUI8 442 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 NLRP4Q96MN2 994 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 DDX47Q9H0S4 455 aaKnown RBP14.35□□□□□ -0.11
NEK4-201ENST00000233027 KCNF1Q9H3M0 494 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 LRRC4Q9HBW1 653 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PI4KBQ9UBF8 816 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 PNMA2Q9UL42 364 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
NEK4-201ENST00000233027 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 DCTN3O75935 186 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 SHC4Q6S5L8 630 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 TRIM67Q6ZTA4 783 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 ARHGAP27Q6ZUM4 889 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 CNKSR1Q969H4 720 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 UBN1Q9NPG3 1134 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms