RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
FRG1-201ENST00000226798 SARSP49591 514 aaKnown RBP13.24□□□□□ -0.29
FRG1-201ENST00000226798 ACTR2P61160 394 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 UBE3AQ05086 875 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 TCF15Q12870 199 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 COL9A3Q14050 684 aaPredicted RBP13.24□□□□□ -0.29
FRG1-201ENST00000226798 FAM43BQ6ZT52 329 aaPredicted RBP13.24□□□□□ -0.29
FRG1-201ENST00000226798 PLPPR4Q7Z2D5 763 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 RBM23Q86U06 439 aaKnown RBP13.24□□□□□ -0.29
FRG1-201ENST00000226798 VN1R2Q8NFZ6 395 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 SUSD6Q92537 303 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 PRRX2Q99811 253 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 PHF7Q9BWX1 381 aaPredicted RBP13.24□□□□□ -0.29
FRG1-201ENST00000226798 AZI2Q9H6S1 392 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
FRG1-201ENST00000226798 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 PRC1O43663 620 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 MGEA5O60502 916 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
FRG1-201ENST00000226798 RXRAP19793 462 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 RBM10P98175 930 aaKnown RBP13.23□□□□□ -0.29
FRG1-201ENST00000226798 KRT76Q01546 638 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 CASC1Q6TDU7 716 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 MTHFD1LQ6UB35 978 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 NME8Q8N427 588 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 FBXL6Q8N531 539 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 CYP2W1Q8TAV3 490 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
FRG1-201ENST00000226798 MXRA8Q9BRK3 442 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 TLE6Q9H808 572 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 ERVK-5Q9HDB9 667 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 TLR9Q9NR96 1032 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
FRG1-201ENST00000226798 MYH9P35579 1960 aaKnown RBP13.23□□□□□ -0.29
FRG1-201ENST00000226798 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
FRG1-201ENST00000226798 RIF1Q5UIP0 2472 aaKnown RBP13.22□□□□□ -0.29
FRG1-201ENST00000226798 IGKV6D-21A0A0A0MT36 114 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 FSD2A1L4K1 749 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 ATG7O95352 703 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 LIFRP42702 1097 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 SLC26A2P50443 739 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 STAT5BP51692 787 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 SIGLEC14Q08ET2 396 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 ITGB3BPQ13352 177 aaPredicted RBP13.22□□□□□ -0.29
FRG1-201ENST00000226798 KCNC3Q14003 757 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 GSE1Q14687 1217 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 DUSP6Q16828 381 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 TMTC3Q6ZXV5 915 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 SUGP1Q8IWZ8 645 aaKnown RBP13.22□□□□□ -0.29
FRG1-201ENST00000226798 TMEM40Q8WWA1 233 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 TMEM87BQ96K49 555 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 CDCA3Q99618 268 aaPredicted RBP13.22□□□□□ -0.29
FRG1-201ENST00000226798 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 PCDHB12Q9Y5F1 795 aa13.22□□□□□ -0.29
FRG1-201ENST00000226798 CCDC69A6NI79 296 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 FSCN2O14926 492 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 PER2O15055 1255 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 FGF18O76093 207 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 CALM1P0DP23 149 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 CALM2P0DP24 149 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 CALM3P0DP25 149 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 ARP10275 920 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 MCM5P33992 734 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 ERVFC1P60507 584 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 TMEM184AQ6ZMB5 413 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 SDF4Q9BRK5 362 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 AGO4Q9HCK5 861 aaKnown RBP13.21□□□□□ -0.29
FRG1-201ENST00000226798 RGS18Q9NS28 235 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 C1orf112Q9NSG2 853 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 NOC2LQ9Y3T9 749 aaKnown RBP13.21□□□□□ -0.29
FRG1-201ENST00000226798 PCDHB7Q9Y5E2 793 aa13.21□□□□□ -0.29
FRG1-201ENST00000226798 COL1A2P08123 1366 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 TBKBP1A7MCY6 615 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 ZBTB42B2RXF5 422 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 C9IYK1 514 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 CCNE2O96020 404 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 KLRC1P26715 233 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
FRG1-201ENST00000226798 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
FRG1-201ENST00000226798 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 FAM102BQ5T8I3 360 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms