RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 CNOT8Q9UFF9 292 aaKnown RBP18.72■□□□□ 0.59
H2AFV-201ENST00000222690 CHORDC1Q9UHD1 332 aaPredicted RBP18.72■□□□□ 0.59
H2AFV-201ENST00000222690 DDX20Q9UHI6 824 aaKnown RBP18.72■□□□□ 0.59
H2AFV-201ENST00000222690 NHSL1Q5SYE7 1610 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 RPS6KA4O75676 772 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 NR3C1P04150 777 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 SLCO1A2P46721 670 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 CD302Q8IX05 232 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 ERMNQ8TAM6 284 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 CTNNBL1Q8WYA6 563 aaPredicted RBP18.72■□□□□ 0.59
H2AFV-201ENST00000222690 NR2E1Q9Y466 385 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 CTNND1O60716 968 aaKnown RBP18.72■□□□□ 0.59
H2AFV-201ENST00000222690 CYP2J2P51589 502 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 E2F5Q15329 346 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 QRICH1Q2TAL8 776 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 FMO2Q99518 471 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 DAGLAQ9Y4D2 1042 aa18.72■□□□□ 0.59
H2AFV-201ENST00000222690 BZW2Q9Y6E2 419 aaKnown RBP18.72■□□□□ 0.59
H2AFV-201ENST00000222690 CACNB3P54284 484 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 GIMAP7Q8NHV1 300 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 TMOD4Q9NZQ9 345 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 PNMA2Q9UL42 364 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 SNX24Q9Y343 169 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 GCFC2P16383 781 aaKnown RBP18.71■□□□□ 0.59
H2AFV-201ENST00000222690 MTMR3Q13615 1198 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 SCFD2Q8WU76 684 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 RAPGEF5Q92565 580 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 USP40Q9NVE5 1235 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 HAUS2Q9NVX0 235 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 BUB1BO60566 1050 aaPredicted RBP18.71■□□□□ 0.59
H2AFV-201ENST00000222690 RPL13P26373 211 aaKnown RBP18.71■□□□□ 0.59
H2AFV-201ENST00000222690 SMARCA1P28370 1054 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 HOXA13P31271 388 aaPredicted RBP18.71■□□□□ 0.59
H2AFV-201ENST00000222690 IFNAR2P48551 515 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 NT5C2P49902 561 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 GKAP1Q5VSY0 366 aaPredicted RBP18.71■□□□□ 0.59
H2AFV-201ENST00000222690 CCDC25Q86WR0 208 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 MYCT1Q8N699 235 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 LRRC4CQ9HCJ2 640 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 RGL1Q9NZL6 768 aa18.71■□□□□ 0.59
H2AFV-201ENST00000222690 FSBPO95073 299 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 ACTRT1Q8TDG2 376 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 SLC40A1Q9NP59 571 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.7■□□□□ 0.58
H2AFV-201ENST00000222690 MYH1P12882 1939 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 DDX3XO00571 662 aaKnown RBP eCLIP18.7■□□□□ 0.583e-8■■■■□ 24.6
H2AFV-201ENST00000222690 PPP1R12BO60237 982 aaPredicted RBP18.7■□□□□ 0.58
H2AFV-201ENST00000222690 ECHS1P30084 290 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 FNTAP49354 379 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 SYCE1Q8N0S2 351 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 SEC16BQ96JE7 1060 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 DDX4Q9NQI0 724 aaKnown RBP18.7■□□□□ 0.58
H2AFV-201ENST00000222690 DLEC1Q9Y238 1755 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 PCDHA2Q9Y5H9 948 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 EVI5O60447 810 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 GIT2Q14161 759 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 EDRF1Q3B7T1 1238 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 C10orf76Q5T2E6 689 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
H2AFV-201ENST00000222690 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 CCDC188H7C350 402 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 HGSO14964 777 aaPredicted RBP18.69■□□□□ 0.58
H2AFV-201ENST00000222690 BIRC3Q13489 604 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
H2AFV-201ENST00000222690 MAEAQ7L5Y9 396 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 LRRC57Q8N9N7 239 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 SLC35G2Q8TBE7 412 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 FAM13AO94988 1023 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 TRIM49P0CI25 452 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 TRIM49CP0CI26 452 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 ARHGAP4P98171 946 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 ZC2HC1CQ53FD0 456 aaPredicted RBP18.69■□□□□ 0.58
H2AFV-201ENST00000222690 LRIG3Q6UXM1 1119 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 TPH2Q8IWU9 490 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 PSMD1Q99460 953 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 PHLPP1O60346 1717 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 NMT1P30419 496 aaKnown RBP18.69■□□□□ 0.58
H2AFV-201ENST00000222690 RBM5P52756 815 aaKnown RBP eCLIP18.69■□□□□ 0.58
H2AFV-201ENST00000222690 SPRED3Q2MJR0 410 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 TMC3Q7Z5M5 1100 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 FRMD5Q7Z6J6 570 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 PPP1R9AQ9ULJ8 1098 aa18.69■□□□□ 0.58
H2AFV-201ENST00000222690 VIMP08670 466 aaKnown RBP18.68■□□□□ 0.58
H2AFV-201ENST00000222690 DR1Q01658 176 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 CTTNQ14247 550 aaKnown RBP18.68■□□□□ 0.58
H2AFV-201ENST00000222690 TRAPPC3LQ5T215 181 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 AADACL2Q6P093 401 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 ARHGAP27Q6ZUM4 889 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 KIAA1551Q9HCM1 1747 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 CAND2O75155 1236 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 TNFAIP3P21580 790 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 FAM186BQ8IYM0 893 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 TMEM59LQ9UK28 342 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 DAAM1Q9Y4D1 1078 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 TRAPPC3O43617 180 aa18.68■□□□□ 0.58
H2AFV-201ENST00000222690 GPATCH4Q5T3I0 446 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms