RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 NKX2-3Q8TAU0 364 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 FAM167BQ9BTA0 163 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 TLR10Q9BXR5 811 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
CHERP-201ENST00000198939 MYH2Q9UKX2 1941 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 PRKAB2O43741 272 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 RANBP1P43487 201 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 AKNAD1Q5T1N1 836 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 PIK3AP1Q6ZUJ8 805 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 PMS1P54277 932 aaKnown RBP11.18□□□□□ -0.62
CHERP-201ENST00000198939 TCP10Q12799 353 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 RASA3Q14644 834 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 LMNTD2Q8IXW0 634 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
CHERP-201ENST00000198939 TATDN2Q93075 761 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 ANAPC4Q9UJX5 808 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 G3BP2Q9UN86 482 aaKnown RBP11.18□□□□□ -0.62
CHERP-201ENST00000198939 ZNF263O14978 683 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 RAD51CO43502 376 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 HSPA9P38646 679 aaKnown RBP11.18□□□□□ -0.62
CHERP-201ENST00000198939 TRADDQ15628 312 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 CRELD2Q6UXH1 353 aaPredicted RBP11.18□□□□□ -0.62
CHERP-201ENST00000198939 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
CHERP-201ENST00000198939 CCDC26Q8TAB7 109 aa11.18□□□□□ -0.62
CHERP-201ENST00000198939 CFAP73A6NFT4 308 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 LUC7L3O95232 432 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 SETSIPP0DME0 302 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 PRPF4BQ13523 1007 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CCT6BQ92526 530 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 SERPINB13Q9UIV8 391 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 TBC1D12O60347 775 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 PALMO75781 387 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 GFPT1Q06210 699 aaPredicted RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 THEMIS2Q5TEJ8 643 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 FBF1Q8TES7 1133 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 IQCDQ96DY2 449 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 CNOT10Q9H9A5 744 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 KCNK3O14649 394 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CEP104O60308 925 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 POLE2P56282 527 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 ATP11AP98196 1134 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CDK17Q00537 523 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 PDE4DQ08499 809 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 CUL1Q13616 776 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 EARS2Q5JPH6 523 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 SLC30A9Q6PML9 568 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 ELAC2Q9BQ52 826 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 SAP30BPQ9UHR5 308 aaKnown RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 FBXL5Q9UKA1 691 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
CHERP-201ENST00000198939 PLAGL2Q9UPG8 496 aa11.17□□□□□ -0.62
CHERP-201ENST00000198939 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 HIRAP54198 1017 aaPredicted RBP11.16□□□□□ -0.62
CHERP-201ENST00000198939 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 RNF10Q8N5U6 811 aaKnown RBP11.16□□□□□ -0.62
CHERP-201ENST00000198939 TSC22D3Q99576 134 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 ORC4O43929 436 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 TRAF1Q13077 416 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 KLHDC7AQ5VTJ3 777 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 DDX42Q86XP3 938 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHERP-201ENST00000198939 SMC1BQ8NDV3 1235 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 AGAP11Q8TF27 550 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 ESR2Q92731 530 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 DHTKD1Q96HY7 919 aaPredicted RBP11.16□□□□□ -0.62
CHERP-201ENST00000198939 XPO6Q96QU8 1125 aaKnown RBP11.16□□□□□ -0.62
CHERP-201ENST00000198939 EBF2Q9HAK2 575 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHERP-201ENST00000198939 ASIC1P78348 528 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 ATP2C1P98194 919 aaPredicted RBP11.16□□□□□ -0.62
CHERP-201ENST00000198939 ARID5AQ03989 594 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 ZNF844Q08AG5 666 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 TAF11Q15544 211 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 AGBL2Q5U5Z8 902 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 CCDC84Q86UT8 332 aaPredicted RBP11.16□□□□□ -0.62
CHERP-201ENST00000198939 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHERP-201ENST00000198939 P2RX5Q93086 422 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 MTMR8Q96EF0 704 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 ISCUQ9H1K1 167 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 SLC12A6Q9UHW9 1150 aa11.16□□□□□ -0.62
CHERP-201ENST00000198939 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.62
CHERP-201ENST00000198939 IRF6O14896 467 aa11.15□□□□□ -0.62
CHERP-201ENST00000198939 MMEP08473 750 aa11.15□□□□□ -0.62
CHERP-201ENST00000198939 PECAM1P16284 738 aaPredicted RBP11.15□□□□□ -0.62
CHERP-201ENST00000198939 CACNB3P54284 484 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms