RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 USP17L15C9J2P7 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L13C9JLJ4 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L11C9JVI0 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L18D6R9N7 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L22D6RA61 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L17D6RBQ6 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L19D6RCP7 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L20D6RJB6 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ZBTB39O15060 712 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 GFPT2O94808 682 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 PRPHP41219 470 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP11P51784 963 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 CDR1P51861 262 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 PLTPP55058 493 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L24Q0WX57 530 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ADAM9Q13443 819 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 NFIXQ14938 502 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 NAA25Q14CX7 972 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ASIC2Q16515 512 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ARSHQ5FYA8 562 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 HERC4Q5GLZ8 1057 aaPredicted RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 TCERG1LQ5VWI1 586 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 TBC1D9BQ66K14 1250 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ALKBH5Q6P6C2 394 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L6PQ6QN14 398 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 FBXO33Q7Z6M2 555 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 GLYCTKQ8IVS8 523 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 CACNA2D3Q8IZS8 1091 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 RNF10Q8N5U6 811 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 TPCN2Q8NHX9 752 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ARHGEF26Q96DR7 871 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 PAGR1Q9BTK6 254 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 NOD2Q9HC29 1040 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ACP6Q9NPH0 428 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 CTNNAL1Q9UBT7 734 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 PCDHA2Q9Y5H9 948 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ATXN2Q99700 1313 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ARFGEF1Q9Y6D6 1849 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 DDX3XO00571 662 aaKnown RBP eCLIP6.36□□□□□ -1.392e-26■■□□□ 13.5
CEACAM1-201ENST00000161559 AKAP3O75969 853 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ATP6V1G2O95670 118 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 GH1P01241 217 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 UCHL3P15374 230 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 HIBADHP31937 336 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 CCNHP51946 323 aaPredicted RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 CLNS1AP54105 237 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 FKBP3Q00688 224 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 COG2Q14746 738 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 FAM26FQ5R3K3 315 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 EMC10Q5UCC4 262 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 PEX26Q7Z412 305 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 FBXO25Q8TCJ0 367 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 U2AF1L4Q8WU68 220 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 ALG3Q92685 438 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 TAF4BQ92750 862 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 PWWP2AQ96N64 755 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 P2RX7Q99572 595 aaKnown RBP6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 KCTD10Q9H3F6 313 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 SEMA4AQ9H3S1 761 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 SH3GLB2Q9NR46 395 aa6.36□□□□□ -1.39
CEACAM1-201ENST00000161559 DDX60LQ5H9U9 1706 aaKnown RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ROBO1Q9Y6N7 1651 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ATMINO43313 823 aaPredicted RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 MYL1P05976 194 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 MMEP08473 750 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 NR2F2P24468 414 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 PON1P27169 355 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 USP8P40818 1118 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 PEX19P40855 299 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 TNNC1P63316 161 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 IFFO1Q0D2I5 559 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 SLC29A2Q14542 456 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 PPP4R3AQ6IN85 833 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 TLDC1Q6P9B6 456 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 DGKHQ86XP1 1220 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ZNF444Q8N0Y2 327 aaPredicted RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 DAGLBQ8NCG7 672 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 LNX1Q8TBB1 728 aaPredicted RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 KCNV2Q8TDN2 545 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 NSMCE1Q8WV22 266 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ATXN2LQ8WWM7 1075 aaKnown RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 CCDC47Q96A33 483 aaKnown RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ZNF317Q96PQ6 595 aaPredicted RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 PSMD1Q99460 953 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 EYA3Q99504 573 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ADAM33Q9BZ11 813 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 VEZTQ9HBM0 779 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 KCNQ5Q9NR82 932 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 ATP8A2Q9NTI2 1148 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 CLEC11AQ9Y240 323 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 PTPN22Q9Y2R2 807 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 SPATA31A1Q5TZJ5 1347 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 TMEM110-MUSTN1A8MSY1 372 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 PGRMC1O00264 195 aaKnown RBP6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 MAP3K13O43283 966 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 MED24O75448 989 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 EPS15P42566 896 aa6.35□□□□□ -1.39
CEACAM1-201ENST00000161559 AMPD3Q01432 767 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms