RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 ACER1Q8TDN7 264 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 LENG9Q96B70 501 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 SBF2Q86WG5 1849 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 EBAG9O00559 213 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 RPA1P27694 616 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 TNNC1P63316 161 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 AIPL1Q9NZN9 384 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 AFF2P51816 1311 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 PLIN4Q96Q06 1357 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 ZNF233A6NK53 670 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 TMEM110-MUSTN1A8MSY1 372 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 KRIT1O00522 736 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 SEC24CP53992 1094 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 ZNF211Q13398 564 aaPredicted RBP9.05□□□□□ -0.96
CDC27-201ENST00000066544 FAM186BQ8IYM0 893 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 METTL13Q8N6R0 699 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 SYT2Q8N9I0 419 aaPredicted RBP9.05□□□□□ -0.96
CDC27-201ENST00000066544 SLC35C1Q96A29 364 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 PCIF1Q9H4Z3 704 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 CALUO43852 315 aaPredicted RBP9.05□□□□□ -0.96
CDC27-201ENST00000066544 MKRN4PQ13434 485 aaPredicted RBP9.05□□□□□ -0.96
CDC27-201ENST00000066544 EDRF1Q3B7T1 1238 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 USP38Q8NB14 1042 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 SART1O43290 800 aaKnown RBP9.05□□□□□ -0.96
CDC27-201ENST00000066544 RRP1BQ14684 758 aaKnown RBP9.05□□□□□ -0.96
CDC27-201ENST00000066544 HYIQ5T013 277 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 PLAAQ9Y263 795 aa9.05□□□□□ -0.96
CDC27-201ENST00000066544 SHTN1A0MZ66 631 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 TISP43B9A030 160 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 FLOT1O75955 427 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 LRCH2Q5VUJ6 765 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 SYCP3Q8IZU3 236 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 UBLCP1Q8WVY7 318 aaPredicted RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 ELMO3Q96BJ8 720 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 RNPC3Q96LT9 517 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 ASTN1O14525 1302 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 GOLGA8KD6RF30 607 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 RBAK-RBAKDNI3L0D1 243 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 DDX3XO00571 662 aaKnown RBP eCLIP9.04□□□□□ -0.966e-8■□□□□ 8.8
CDC27-201ENST00000066544 DAPK3O43293 454 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 RPL13P26373 211 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 RINT1Q6NUQ1 792 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 HHIPL2Q6UWX4 724 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 VPS36Q86VN1 386 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 BANK1Q8NDB2 785 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 NOC2LQ9Y3T9 749 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 EVI5O60447 810 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 GALCP54803 685 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 FBXO28Q9NVF7 368 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 NR2E1Q9Y466 385 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 CHRNA5P30532 468 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 ITIH3Q06033 890 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 EPHA7Q15375 998 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 ODF2Q5BJF6 829 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 ODR4Q5SWX8 454 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 UHMK1Q8TAS1 419 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 PPANQ9NQ55 473 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 TYW1Q9NV66 732 aaKnown RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 NYAP2Q9P242 653 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 SMIM23A6NLE4 172 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 OPLAHO14841 1288 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 TGFB1I1O43294 461 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 FLT3P36888 993 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 MIGA2Q7L4E1 593 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 PALB2Q86YC2 1186 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 FAM178BQ8IXR5 827 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 DCAF4Q8WV16 495 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 PRMT6Q96LA8 375 aaPredicted RBP9.04□□□□□ -0.96
CDC27-201ENST00000066544 TRIM51Q9BSJ1 452 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 NEUROG2Q9H2A3 272 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 FAM169AQ9Y6X4 670 aa9.04□□□□□ -0.96
CDC27-201ENST00000066544 CDK5RAP2Q96SN8 1893 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 PITPNM2Q9BZ72 1349 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 EIF3HO15372 352 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDC27-201ENST00000066544 TTI1O43156 1089 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 GAS7O60861 476 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 STAT1P42224 750 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 AP3B2Q13367 1082 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 DRAP1Q14919 205 aaPredicted RBP9.03□□□□□ -0.96
CDC27-201ENST00000066544 AOC3Q16853 763 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 TMEM179Q6ZVK1 233 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 FRMD5Q7Z6J6 570 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 NAP1L4Q99733 375 aaKnown RBP9.03□□□□□ -0.96
CDC27-201ENST00000066544 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 PDXKO00764 312 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 ECE2O60344 883 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 ALS2CLQ60I27 953 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 TPCN2Q8NHX9 752 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 TRAF3IP3Q9Y228 551 aa9.03□□□□□ -0.96
CDC27-201ENST00000066544 EXOC3O60645 756 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms