RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ccdc157Q5SPX1 718 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 FntaQ61239 377 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Q6PD19 689 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ccdc57Q6PHN1 1016 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Nek5Q7TSC3 627 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Scyl2Q8CFE4 930 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tldc1Q8K0P3 455 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 PdxkQ8K183 312 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Slc18a1Q8R090 521 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Luc7lQ9CYI4 371 aaKnown RBP11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 NkapQ9D0F4 415 aaKnown RBP11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cntn6Q9JMB8 1028 aa11.12□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 1700016G14RikA0A286YCZ6 238 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 ThbdP15306 577 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Frmd8Q3UFK8 466 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cacna2d4Q5RJF7 1116 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Atp13a4Q5XF90 1193 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Psen2Q61144 448 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Sp4Q62445 782 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 RbsnQ80Y56 783 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cbwd1Q8VEH6 393 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 PdhbQ9D051 359 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Sapcd2Q9D818 391 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fthl17aQ9DAX0 182 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 AatfQ9JKX4 526 aaKnown RBP11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cbx8Q9QXV1 362 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 EmcnQ9R0H2 261 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Peg12Q9WVA7 283 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Extl3Q9WVL6 918 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fem1bQ9Z2G0 627 aa11.11□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Has3O08650 554 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 XlrP05531 208 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cep126Q0VBV7 1103 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Phactr1Q2M3X8 580 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Znf652Q5DU09 608 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tmprss11eQ5S248 423 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 IbspQ61711 324 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 PrimpolQ6P1E7 537 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 NfrkbQ6PIJ4 1296 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tlr11Q6R5P0 926 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Bola2Q8BGS2 86 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Kif2bQ8C0N1 668 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Vps52Q8C754 723 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 H6pdQ8CFX1 789 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ubxn1Q922Y1 297 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Serpinb3bQ9D1Q5 387 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cse1lQ9ERK4 971 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ripor3A1L3T7 938 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fam71aB7XG49 585 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ccdc78D3Z5T1 437 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Dnajc21E9Q8D0 531 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Zfp408H7BX78 710 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cyth3O08967 399 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Sema4dO09126 861 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cyp11b2P15539 500 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Etv6P97360 485 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 HmmrQ00547 794 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Lmntd2Q0VET5 664 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Rtel1Q0VGM9 1203 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Mier3Q3UHF3 551 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ccdc34Q3UI66 367 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Sin3bQ62141 1098 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ddx3xQ62167 662 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Gpd2Q64521 727 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Lrig3Q6P1C6 1117 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ppp2r5aQ6PD03 486 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 TbataQ7TSD4 393 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Fam111aQ9D2L9 613 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Slc15a2Q9ES07 729 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Map3k20Q9ESL4 802 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 EcsitQ9QZH6 435 aa11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Tjp2Q9Z0U1 1167 aaKnown RBP11.1□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Skint3A7TZF0 458 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Ppp1r9aH3BJD6 1292 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Gm8298J3QPI0 401 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Exoc4O35382 975 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Slc16a2O70324 545 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Sh3bp1P55194 680 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Map4k1P70218 827 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Kiaa1211Q5PR69 1207 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Gm11437Q5QR91 290 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 P4ha1Q60715 534 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 FdxrQ61578 494 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Vil1Q62468 827 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Mcf2lQ64096 1149 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Pgrmc2Q80UU9 217 aaKnown RBP11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Lmo3Q8BZL8 145 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Kiaa0391Q8JZY4 584 aaKnown RBP11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Shtn1Q8K2Q9 631 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Reep2Q8VCD6 254 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Grtp1Q9D3N8 359 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Prl2b1Q9DAZ2 228 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Cry2Q9R194 592 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Lamb2Q61292 1799 aa11.09□□□□□ -0.63
Cpsf3-211ENSMUST00000222968 Lcmt1A0A0U1RNF2 332 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 TazI7HJS2 263 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Akap2O54931 893 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Slc12a2P55012 1205 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Rps6P62754 249 aaKnown RBP11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Evi5P97366 809 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms