RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Pfdn4Q3UWL8 134 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Rundc3bQ6PDC0 408 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ece2Q80Z60 881 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Prpf18Q8BM39 342 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ttc12Q8BW49 704 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ankk1Q8BZ25 745 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Dnajc9Q91WN1 259 aaKnown RBP11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Apobec2Q9WV35 224 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Tns3Q5SSZ5 1440 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Mon2Q80TL7 1715 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Gm382B1AXN3 1250 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Unc13dB2RUP2 1085 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Gm10639E9Q6L7 222 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Rap1gds1E9Q912 607 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Gm5624F6ZZG8 207 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Api5O35841 504 aaKnown RBP11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 FosbP13346 338 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Scg2Q03517 617 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Limch1Q3UH68 1057 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Armc7Q3UJZ3 198 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Fam169aQ5XG69 665 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ccdc154Q6RUT8 657 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Spag7Q7TNE3 227 aaKnown RBP11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 UnkQ8BL48 810 aaKnown RBP11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Atf7Q8R0S1 413 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Abcc10Q8R4P9 1501 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Wdr19Q3UGF1 1341 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Mcmdc2E9Q956 681 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 E2f6O54917 272 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Olfm1O88998 485 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 PpargP37238 505 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Atp8b2P98199 1209 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Iqsec3Q3TES0 1195 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Vav2Q60992 868 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ddx10Q80Y44 875 aaKnown RBP11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Anks1bQ8BIZ1 1259 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Cox10Q8CFY5 443 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Mapk8Q91Y86 384 aa11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Fastkd2Q922E6 689 aaKnown RBP11.93□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ttc17E9PVB5 1198 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ube3aO08759 870 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 IkbkbO88351 757 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Epb41l4aP52963 686 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Patl1Q3TC46 770 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Gsdmc4Q3TR54 480 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 CcncQ62447 283 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Gm9758Q80ZT2 255 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Tango6Q8C3S2 1079 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Rec8Q8C5S7 591 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Pde5aQ8CG03 865 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Srgap2Q91Z67 1071 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ppil4Q9CXG3 492 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Mrpl44Q9CY73 333 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Sh2d4aQ9D7V1 421 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Olfr1145A2AVC7 325 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Tcp1P11983 556 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Cdc25bP30306 576 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Cct7P80313 544 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ccser2Q3UHI0 833 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Islr2Q5RKR3 745 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ccdc92bQ5SUE3 299 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 B3glctQ8BHT6 489 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Skor1Q8BX46 964 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Tcp11l2Q8K1H7 517 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ciapin1Q8WTY4 309 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Znf622Q91VY9 476 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Sec16bQ91XT4 1051 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Drc3Q9D5E4 523 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Speer4bQ9D9F7 267 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ror2Q9Z138 944 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Gm20425E9Q035 978 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Fam167bP17257 162 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Pde6aP27664 859 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ankrd13bQ5F259 626 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Tcf12Q61286 706 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Clec16aQ80U30 1036 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Galnt5Q8C102 930 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ptcd2Q8R3K3 381 aaKnown RBP11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Bbs5Q9CZQ9 341 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Fam111aQ9D2L9 613 aa11.92□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Kdm3aQ6PCM1 1323 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Kif28pD3YXS5 1028 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Atp6v0a2P15920 856 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 PrkacbP68181 351 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Chl1P70232 1209 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Ppme1Q8BVQ5 386 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Satb2Q8VI24 733 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Snx9Q91VH2 595 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 MbipQ99LQ1 341 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Hsf3D0VYS2 492 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Bin1O08539 588 aaKnown RBP11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Pfkfb1P70266 471 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Rbm46P86049 533 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Itgb8Q0VBD0 767 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Tspan1Q99J59 240 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Lpin2Q99PI5 893 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 StambpQ9CQ26 424 aa11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Mrps25Q9D125 171 aaKnown RBP11.91□□□□□ -0.5
Srp54b-202ENSMUST00000218879 Hmg20bQ9Z104 317 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms