RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Usp50Q6P8X6 390 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Zbtb39Q6PDK0 712 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ttc22Q8C159 568 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rasal3Q8C2K5 1041 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem134Q8R0J4 195 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ifih1Q8R5F7 1025 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Vwa5aQ99KC8 793 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Mrfap1Q9CQL7 125 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Pik3c2aQ61194 1686 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Med23Q80YQ2 1367 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 A0A1Y7VML8 143 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ift81O35594 676 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Alox15P39654 663 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nlrx1Q3TL44 975 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Wdr70Q3TWF6 657 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Madcam1Q61826 405 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cyp4x1Q6A152 507 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dcaf15Q6PFH3 600 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 NfrkbQ6PIJ4 1296 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Daam2Q80U19 1115 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 FtoQ8BGW1 502 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nop53Q8BK35 484 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Serpinb13Q8CDC0 389 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Pus7lQ8CE46 702 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Trpm8Q8R4D5 1104 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lrrc14Q8VC16 493 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fkbp6Q91XW8 327 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cdk9Q99J95 372 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem192Q9CXT7 266 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Olr1Q9EQ09 363 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ccnt1Q9QWV9 724 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ubxn8Q9QZ49 277 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Coro1cQ9WUM4 474 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 CpdO89001 1377 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lrp6O88572 1613 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Atp2c2A7L9Z8 944 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Spocd1B1ASB6 936 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Arhgap42B2RQE8 841 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm1758F6VZZ1 202 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Abcb4P21440 1276 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ag2Q3UPL5 249 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Brsk2Q69Z98 735 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tlr11Q6R5P0 926 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fbxo11Q7TPD1 930 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cpa1Q7TPZ8 419 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Bola2Q8BGS2 86 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Orc3Q9JK30 715 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Celf2Q9Z0H4 508 aaKnown RBP9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sall1Q9ER74 1322 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ildr2B5TVM2 661 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lrrc23O35125 340 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sept7O55131 436 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 PltpP55065 493 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rnf216P58283 853 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmtc1Q3UV71 942 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 RilpQ5ND29 369 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 NostrinQ6WKZ7 506 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cracr2bQ80ZJ8 394 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fam102bQ8BQS4 339 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Morc2bQ8C5W4 1022 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Exd1Q8CDF7 570 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ssh3Q8K330 649 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Grin3bQ91ZU9 1003 aa9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nop56Q9D6Z1 580 aaKnown RBP9.52□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fyb2A2A995 729 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Prss40A6H6T1 365 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Kcnk16G5E845 292 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Stag2O35638 1231 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 M6prP24668 278 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Senp1P59110 640 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 StilQ60988 1262 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sorbs1Q62417 1290 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Fkbp3Q62446 224 aaKnown RBP9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Nlrp4eQ66X19 978 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Snx14Q8BHY8 964 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 L3mbtl3Q8BLB7 883 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Prl7b1Q8CGZ9 251 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ints9Q8K114 658 aaKnown RBP9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Kdm8Q9CXT6 414 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Acsl3Q9CZW4 720 aaKnown RBP9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Lman1Q9D0F3 517 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Sept12Q9D451 317 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rwdd2aQ9D9S3 292 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 IydQ9DCX8 285 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ndst4Q9EQW8 872 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Hsf3D0VYS2 492 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Tph1P17532 447 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 HpdP49429 393 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rhbdl3P58873 404 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 RelaQ04207 549 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Slc9a2Q3ZAS0 814 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Ccdc85aQ5SP85 500 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Hdac4Q6NZM9 1076 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Slc44a1Q6X893 653 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Haus4Q8BFT2 363 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 WdpcpQ8C456 722 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Znf445Q8R2V3 986 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Caap1Q8VDY9 356 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Rabep2Q91WG2 554 aa9.52□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Prkag2Q91WG5 566 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms