RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Atp2b4Q6Q477 1205 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 TufmQ8BFR5 452 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Ccdc28bQ8CEG5 200 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Pcdha4O88689 947 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Q80ZQ3 298 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Arid5bQ8BM75 1188 aaKnown RBP8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Kcns3Q8BQZ8 491 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Ccdc90bQ8C3X2 256 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Fbxo18Q8K2I9 1042 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Pdik1lQ8QZR7 341 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 FtcdQ91XD4 541 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Trip4Q9QXN3 581 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Gm20911A0A087WSS0 222 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Ckap2Q3V1H1 664 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Mms19Q9D071 1031 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Lrrc9Q8CDN9 1456 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 RpainQ9CWY9 219 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Cog1Q9Z160 980 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Slc44a1Q6X893 653 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Atp10dQ8K2X1 1416 aa8.72□□□□□ -1.01
Spen-201ENSMUST00000078886 Gnat1P20612 350 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Epas1P97481 874 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Pdp2Q504M2 532 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 QarsQ8BML9 775 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Yars2Q8BYL4 472 aaKnown RBP8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Pcdhb15Q91Y04 786 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Hps4Q99KG7 671 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Dbndd1Q9CZ00 160 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Gm10250G3X9L6 160 aaKnown RBP8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 TpbpaP13438 124 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Kmt5aQ2YDW7 349 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Krt76Q3UV17 594 aaKnown RBP8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 2900092C05RikQ5I0V9 184 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 ChukQ60680 745 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Atp5hQ9DCX2 161 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Kiaa1468Q148V7 1216 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Aldh3b1Q80VQ0 468 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 4930513O06RikQ9D549 161 aa8.71□□□□□ -1.01
Spen-201ENSMUST00000078886 Wdr27Q8C5V5 780 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Snx24Q9CRB0 169 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Snx2Q9CWK8 519 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Cdk13Q69ZA1 1511 aaKnown RBP8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Apol6B7ZC55 329 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Trim43aQ3TL54 445 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Sptlc3Q8BG54 563 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Retreg1dQ8VE91 480 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Ccdc81Q9D5W4 654 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Pold1P52431 1105 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 NfkbibQ60778 359 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Nacc1Q7TSZ8 514 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Erich5Q8K0S2 362 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 GsdmeQ9Z2D3 512 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Nck2O55033 380 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Gad1P48318 593 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Ftl2P49945 183 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Lrrc41Q8K1C9 807 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Srgap2Q91Z67 1071 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Atp5f1Q9CQQ7 256 aaKnown RBP8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Trpc4Q9QUQ5 974 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Krt78E9Q0F0 1068 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Tmcc1Q69ZZ6 649 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 CcnyQ8BGU5 341 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Rfx6Q8C7R7 927 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Kcnv2Q8CFS6 562 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Ube2q2Q8K2Z8 378 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Mcrs1Q99L90 462 aa8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 MrrfQ9D6S7 262 aaKnown RBP8.71□□□□□ -1.02
Spen-201ENSMUST00000078886 Gap43P06837 227 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Large2Q5XPT3 690 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Mknk2Q8CDB0 459 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Tp53bp2Q8CG79 1128 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Smap1Q91VZ6 440 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Grtp1Q9D3N8 359 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Skint5A7XUY5 1461 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 CntrlA2AL36 2334 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Gm28897A0A087WP44 222 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Lipo1J3QME6 396 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Krt10P02535 570 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 C87499Q3UX49 493 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Fam160a1Q505K2 1081 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Smg5Q6ZPY2 1017 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Znf473Q8BI67 892 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 MyripQ8K3I4 856 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Haus8Q99L00 373 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Tfap4Q9JIZ5 338 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Map3k19E9Q3S4 1311 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Syngap1F6SEU4 1340 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 FosP01101 380 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Gfpt1P47856 697 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Ksr1Q61097 873 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Ddx3yQ62095 658 aaKnown RBP8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Rrp1bQ91YK2 724 aaKnown RBP8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Habp4Q9JKS5 411 aaKnown RBP8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Gpatch8A2A6A1 1505 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Klc1O88447 541 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Axin2O88566 840 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Znf428Q8C1M2 176 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Cwf19l1Q8CI33 537 aa8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Serbp1Q9CY58 407 aaKnown RBP8.7□□□□□ -1.02
Spen-201ENSMUST00000078886 Batf3Q9D275 118 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms