RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Bco2Q99NF1 532 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Dph6Q9CQ28 267 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 YwhabQ9CQV8 246 aaKnown RBP12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Tmem39aQ9CYC3 486 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 2310002L09RikQ9D7L5 217 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Nol7Q9D7Z3 254 aaKnown RBP12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ap1b1O35643 943 aaKnown RBP12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Slc16a2O70324 545 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Lamp1P11438 406 aaKnown RBP12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Irf8P23611 424 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Kcna2P63141 499 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Vgll3P85442 326 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Uri1Q3TLD5 531 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 E2f8Q58FA4 860 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Gas8Q60779 478 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Shc3Q61120 474 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Hspa4Q61316 841 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ddx3yQ62095 658 aaKnown RBP12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tll1Q62381 1013 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ppp2r5aQ6PD03 486 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Hook2Q7TMK6 716 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Cdc23Q8BGZ4 597 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Pnma1Q8C1C8 353 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Vps52Q8C754 723 aaKnown RBP12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Sulf1Q8K007 870 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Fam13bQ8K2H3 851 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ero1bQ8R2E9 467 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tas1r3Q925D8 858 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ranbp17Q99NF8 1088 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ccdc43Q9CR29 222 aaKnown RBP12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Mageb16Q9CWV4 363 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 NapgQ9CWZ7 312 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ears2Q9CXJ1 523 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Dnajc18Q9CZJ9 357 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Slc15a2Q9ES07 729 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 FibpQ9JI19 357 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ngly1Q9JI78 651 aa12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Rpf2Q9JJ80 306 aaKnown RBP12.39□□□□□ -0.43
Vamp1-202ENSMUST00000063588 MafgO54790 162 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Men1O88559 611 aaKnown RBP12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Prkg1P0C605 671 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Stat4P42228 749 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Gtf2bP62915 316 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Psmb7P70195 277 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Taf1bP97358 586 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Serpina1eQ00898 413 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Phactr1Q2M3X8 580 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Emc10Q3TAS6 258 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Pdlim7Q3TJD7 457 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Eif3j1Q3UGC7 261 aaKnown RBP12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Krt31Q61765 416 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ccpg1Q640L3 753 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Entpd3Q8BFW6 529 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ipo5Q8BKC5 1097 aaKnown RBP12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tada3Q8R0L9 432 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Slc14a1Q8VHL0 384 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Eif4a3Q91VC3 411 aaKnown RBP12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Uap1Q91YN5 522 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Med15Q924H2 789 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Q9CYI0 393 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Olr1Q9EQ09 363 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Klra17Q9JMA4 273 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Slc12a7Q9WVL3 1083 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Col11a1Q61245 1804 aa12.38□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Dhtkd1A2ATU0 921 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Timm44O35857 452 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 IkbkbO88351 757 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 UgcgO88693 394 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Kif2aP28740 705 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Serpinc1P32261 465 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ly9Q01965 654 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Rnf207Q3V3A7 635 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Trim25Q61510 634 aaKnown RBP12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 NntQ61941 1086 aaKnown RBP12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ncoa7Q6DFV7 943 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Zdhhc15Q8BGJ0 337 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tmco3Q8BH01 678 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Usp37Q8C0R0 979 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Reep2Q8VCD6 254 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Nrbp2Q91V36 499 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Bzw2Q91VK1 419 aaKnown RBP12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tmem132aQ922P8 1018 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Luc7lQ9CYI4 371 aaKnown RBP12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Grtp1Q9D3N8 359 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tmod4Q9JLH8 345 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ercc4Q9QZD4 917 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Hebp1Q9R257 190 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 AunipE9Q6Z5 340 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Nfxl1E9Q8I7 918 aaKnown RBP12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Gm1758F6VZZ1 202 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 B020004C17RikJ3QP07 232 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Ccnd2P30280 289 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Eepd1Q3TGW2 569 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Slc10a4Q3UEZ8 437 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tsr1Q5SWD9 803 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Cep70Q6IQY5 616 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Tmem130Q6NXM3 419 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Hdac10Q6P3E7 666 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 TbataQ7TSD4 393 aa12.37□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Snip1Q8BIZ6 383 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms