RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Kansl3A2RSY1 903 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Taf4E9QAP7 1042 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Znf771Q8BJ90 317 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Znf76Q8BMU0 568 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Slc7a14Q8BXR1 771 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Wdr27Q8C5V5 780 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Med24Q99K74 987 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 XdhQ00519 1335 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Kif11Q6P9P6 1052 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 IqceQ6PCQ0 778 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Znf365Q8BG89 408 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Prc1Q99K43 603 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tlr3Q99MB1 905 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mis18aQ9CZJ6 204 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Celf5D3Z4T1 395 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Serpina1aP07758 413 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Serpina1bP22599 413 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ctnna1P26231 906 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Serpina1cQ00896 412 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Serpina1dQ00897 413 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 EmsyQ8BMB0 1264 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Lonp1Q8CGK3 949 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Spon1Q8VCC9 807 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rpa3Q9CQ71 121 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cox16Q9CR63 106 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 MajinQ9D992 256 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fthl17aQ9DAX0 182 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ggps1Q9WTN0 300 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gnrh1P13562 90 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Kcna1P16388 495 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Xrcc6P23475 608 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Taok1Q5F2E8 1001 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nemp2Q8CB65 421 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ccdc87Q8CDL9 855 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Dcdc2bF7BCK0 340 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ncf2O70145 525 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gdap1O88741 358 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Siglec10Q80ZE3 688 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cep95Q8BVV7 827 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 DpydQ8CHR6 1025 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rbm42Q91V81 474 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 HlcsQ920N2 722 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Josd2Q9CR30 188 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fxr2Q9WVR4 673 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mt-CybP00158 381 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Atoh1P48985 351 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Spdye4aQ5IBH6 268 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fam183bQ5NC57 135 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tbc1d30Q69ZT9 766 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cplx4Q80WM3 160 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Golga1Q9CW79 758 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tmx2Q9D710 295 aaKnown RBP12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Krt71Q9R0H5 524 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Zkscan5Q9Z1D8 819 aa12.81□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rfpl4bJ3QPR6 266 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Diaph2O70566 1098 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pla2g4bP0C871 782 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Stat4P42228 749 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pla2g4aP47713 748 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Trim72Q1XH17 477 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm10488Q4KL05 212 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cd180Q62192 661 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pip5kl1Q6U7H8 395 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Slc38a7Q8BWH0 463 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Il31raQ8K5B1 716 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Glis2Q8VDL9 521 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Abcb11Q9QY30 1321 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Hoxd10P28359 340 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 ItkQ03526 625 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Lgr6Q3UVD5 967 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Zbtb17Q60821 794 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ppp1r11Q8K1L5 131 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Eps8l1Q8R5F8 716 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ddx20Q9JJY4 825 aaKnown RBP12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Lrrc38A2VDH3 298 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Card6E9PWH2 1175 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 DffaO54786 331 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nck2O55033 380 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Best3Q6H1V1 669 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fbxo41Q6NS60 873 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Lig4Q8BTF7 911 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 MlphQ91V27 590 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ngly1Q9JI78 651 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cib2Q9Z309 187 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pcdh11xF6ZNL5 1338 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tcp11Q01755 566 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nt5c2Q3V1L4 560 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Atp13a3Q5XF89 1219 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tbc1d31Q6NXY1 996 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Spag7Q7TNE3 227 aaKnown RBP12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Vta1Q9CR26 309 aa12.8□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Zc3h18Q0P678 948 aaKnown RBP12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Oog3Q3UWY1 500 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Dpf2Q61103 391 aaKnown RBP12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Oxnad1Q8VE38 311 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tom1l1Q923U0 474 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Card14Q99KF0 999 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Kcnh7Q9ER47 1195 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Doc2gQ9ESN1 387 aa12.79□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ripor3A1L3T7 938 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms