RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 IdeQ9JHR7 1019 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 ThegQ9JMB1 375 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ice1E9Q286 2241 aaKnown RBP11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Tiam2Q6ZPF3 1715 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gm43738A0A0G2JEA5 862 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Cul4bA2A432 970 aaKnown RBP11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gpr161B2RPY5 545 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gm4297D3YWB7 211 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Foxm1O08696 760 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Tuft1O08970 390 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Arhgap6O54834 987 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Znf667Q2TL60 609 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 SpertQ32MG2 446 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 FaxcQ3UMF9 409 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 ErmnQ5EBJ4 281 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Zbtb39Q6PDK0 712 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 CntrobQ8CB62 887 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Tmem60Q8K174 133 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 PccaQ91ZA3 724 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Vwa5aQ99KC8 793 aaKnown RBP11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Snx10Q9CWT3 201 aa11.52□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Sh2d4bA6X942 431 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Celf1P28659 486 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ephb4P54761 987 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 GabpaQ00422 454 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 ChukQ60680 745 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Jade1Q6ZPI0 834 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 L3mbtl3Q8BLB7 883 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Heatr3Q8BQM4 679 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Inpp5fQ8CDA1 1132 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nxf1Q99JX7 618 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 RtcbQ99LF4 505 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Tex21Q9R0U9 575 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Cfap70D3YVL2 1141 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Klra1P20937 262 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Thumpd3P97770 505 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 TdrkhQ80VL1 560 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Sgsm1Q8BPQ7 1093 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Kcnq5Q9JK45 933 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Hdac6Q9Z2V5 1149 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Olfr247E9PVJ7 320 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Olfr819K7N727 320 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Prl2c2P04095 224 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Atf2P16951 487 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gnat1P20612 350 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Runx2Q08775 607 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Eepd1Q3TGW2 569 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Spata5Q3UMC0 893 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Tbx2Q60707 711 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Epc2Q8C0I4 808 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Arhgap24Q8C4V1 747 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 HscbQ8K3A0 234 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 PlekQ9JHK5 350 aaKnown RBP11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Hs6st3Q9QYK4 470 aa11.51□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gm14525B1AZA0 212 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gm2012B1B0R1 212 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Pgrmc1O55022 195 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Idh1O88844 414 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Serpina1bP22599 413 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Alppl2P24823 529 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nub1P54729 614 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Vps33bP59016 617 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ccdc138Q0VF22 680 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Klrb1Q0ZUP1 214 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ddb1Q3U1J4 1140 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Dab2ipQ3UHC7 1189 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Fbxw10Q5SUS0 1030 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Xlr3bQ6P205 226 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ankrd13aQ80UP5 588 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ddhd1Q80YA3 547 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Znf365Q8BG89 408 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Cog5Q8C0L8 829 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Fgfr1op2Q9CRA9 253 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Smyd3Q9CWR2 428 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Scyl1Q9EQC5 806 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Hao1Q9WU19 370 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Serpinb6cW4VSP4 379 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Igsf9bE9PZ19 1328 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Dnaaf5B9EJR8 853 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gm8994E9PV04 411 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Gm4340L7N2C4 268 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Stat5bP42232 786 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Spg7Q3ULF4 781 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Hoxa13Q62424 386 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nlrp4aQ8BU40 982 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Epha10Q8BYG9 1007 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Trim9Q8C7M3 817 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Abcf3Q8K268 709 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Akr1c14Q91WT7 323 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nme5Q99MH5 211 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Nsmce3Q9CPR8 279 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Mtfr1lQ9CWE0 289 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 TarsQ9D0R2 722 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Rfwd2Q9R1A8 733 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Alox15P39654 663 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ag2Q3UPL5 249 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 ItgaeQ60677 1167 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Orc2Q60862 576 aaKnown RBP11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Ttll4Q80UG8 1193 aa11.5□□□□□ -0.57
Rnf40-201ENSMUST00000033088 Dpp8Q80YA7 892 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms