RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Garem2Q6PAJ3 880 aa22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Ppp2r5aQ6PD03 486 aa22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Actn1Q7TPR4 892 aaKnown RBP22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Tmx2Q9D710 295 aaKnown RBP22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Sapcd2Q9D818 391 aa22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Fthl17aQ9DAX0 182 aa22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Brca1P48754 1812 aa22.6■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Gm3409A0A0G2JE67 319 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Oip5A2AQ14 241 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Kif3cO35066 796 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 ThbdP15306 577 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Mmp20P57748 482 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Irf6P97431 467 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Klra9Q2TJJ8 266 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 GmpsQ3THK7 693 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Trim43aQ3TL54 445 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Tfcp2l1Q3UNW5 479 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Gpd2Q64521 727 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Mapk4Q6P5G0 583 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Q8C1R3 189 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 PdxkQ8K183 312 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Mmgt1Q8K273 131 aaKnown RBP22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Slc14a1Q8VHL0 384 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Creb3l3Q91XE9 479 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Gtpbp4Q99ME9 634 aaKnown RBP22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 CsadQ9DBE0 493 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Sh2b2Q9JID9 621 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Rgs17Q9QZB0 210 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Scn10aQ6QIY3 1958 aa22.59■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Gm28919A0A087WP35 240 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Enc1O35709 589 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 FechP22315 420 aaKnown RBP22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Rps6P62754 249 aaKnown RBP22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Nhej1Q3KNJ2 295 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Oog3Q3UWY1 500 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Ccdc157Q5SPX1 718 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 MmeQ61391 750 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Scyl2Q8CFE4 930 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 DnerQ8JZM4 737 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Calml4Q91WQ9 153 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Q91Z58 1206 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Ergic2Q9CR89 377 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Galnt15Q9D2N8 638 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Grtp1Q9D3N8 359 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Slc15a2Q9ES07 729 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Adgrf5G5E8Q8 1348 aa22.58■■□□□ 1.21
Cdx1-201ENSMUST00000025521 Serpinb8O08800 374 aaKnown RBP22.58■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Usp17leQ7M764 540 aa22.58■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Ccdc73Q8CDM4 1066 aa22.58■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Pcdhb12Q91Y07 789 aa22.58■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Spata17Q9D552 379 aa22.58■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Cse1lQ9ERK4 971 aaKnown RBP22.58■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Gm45194A0A140LJG2 572 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Pgap3A2A559 320 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Gfpt1P47856 697 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Rbm46P86049 533 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Lrig3Q6P1C6 1117 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Lrrc1Q80VQ1 524 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Senp7Q8BUH8 1037 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Bcas3Q8CCN5 928 aa22.57■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Klhdc7aA2APT9 773 aa22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Pgrmc2Q80UU9 217 aaKnown RBP22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Camkk2Q8C078 588 aa22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Shtn1Q8K2Q9 631 aa22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 TxlnbQ8VBT1 685 aa22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Smc1aQ9CU62 1233 aaKnown RBP22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Cd2bp2Q9CWK3 342 aaKnown RBP22.56■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Foxn2E9Q7L6 429 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 TazI7HJS2 263 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Gm4758L7N258 96 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Tnfrsf11aO35305 625 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 GcP21614 476 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Anp32eP97822 260 aaKnown RBP22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Ankrd13cQ3UX43 541 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Sv2cQ69ZS6 727 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Fmnl3Q6ZPF4 1028 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Reep2Q8VCD6 254 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 SnrpfP62307 86 aaKnown RBP22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Ccdc34Q3UI66 367 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Ppp1r13bQ62415 1087 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 PicalmQ7M6Y3 660 aaKnown RBP22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 TbataQ7TSD4 393 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Bri3bpQ8BXV2 253 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Usp15Q8R5H1 981 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Rbp7Q9EPC5 134 aa22.55■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Lamb2Q61292 1799 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Taf4bG5E8Z2 855 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Pja1O55176 578 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Slc16a2O70324 545 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 MybP06876 636 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Irf8P23611 424 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Pla2g4aP47713 748 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Atp13a4Q5XF90 1193 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Tcf12Q61286 706 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Tgoln2Q62314 363 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Exoc3Q6KAR6 755 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Leng8Q8CBY3 785 aaKnown RBP22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 H6pdQ8CFX1 789 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Il17cQ8K4C5 194 aa22.54■■□□□ 1.2
Cdx1-201ENSMUST00000025521 Pls3Q99K51 630 aa22.54■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms