RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ap1b1O35643 943 aaKnown RBP4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 PtprcP06800 1291 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ddit3P35639 168 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Zdhhc9P59268 364 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Otub1Q7TQI3 271 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Slc8a2Q8K596 921 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Rnf8Q8VC56 488 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Kctd10Q922M3 315 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Mageb16Q9CWV4 363 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Rnf6Q9DBU5 667 aa4.89□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Vmn2r71L7N2D8 855 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tnnc2P20801 160 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ankrd40Q5SUE8 363 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tspan17Q9D7W4 270 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Crb1Q8VHS2 1405 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ccdc88aQ5SNZ0 1873 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ubap1lG3UW59 384 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Rtn2O70622 471 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ccdc153P0C7Q1 202 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Cyfip2Q5SQX6 1253 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ddx3yQ62095 658 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tsr2Q8C8T8 191 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Stap2Q8R0L1 411 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tmx1Q8VBT0 278 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Pcdhb21Q91V48 774 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Dnajc3Q91YW3 504 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Cst12Q9DAN8 128 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Rabgef1Q9JM13 491 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Camta1A2A891 1682 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 BcorQ8CGN4 1759 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Prmt9Q3U3W5 846 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Apol9aQ8VDU3 310 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Q9CR55 154 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Fut8Q9WTS2 575 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ugt1a5B2RT14 529 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Serpina1eQ00898 413 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tcp11Q01755 566 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Naa35Q6PHQ8 725 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Letm2Q7TNU7 480 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Mfn1Q811U4 741 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Slf1Q8R3P9 1054 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 CtsqQ91ZF4 343 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tmco1Q921L3 188 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 ArhgdiaQ99PT1 204 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Prpsap1Q9D0M1 356 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Grtp1Q9D3N8 359 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ccdc130Q9D516 385 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Mgea5Q9EQQ9 916 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Slfn1Q9Z0I7 337 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Zfp804bA0A0G2JGH6 1343 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Usp31E9Q6Y8 1344 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 CoblQ5NBX1 1337 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Cyth3O08967 399 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ect2Q07139 913 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Churc1Q6DG52 112 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Wdr35Q8BND3 1181 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Trim12aQ99PQ1 284 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tex28B1AYN9 409 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 IkbkbO88351 757 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Aplp1Q03157 653 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Acot10Q32MW3 439 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Fbxw10Q5SUS0 1030 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tcf12Q61286 706 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Nlrp4aQ8BU40 982 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tldc1Q8K0P3 455 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Serpinb3bQ9D1Q5 387 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Chrm1P12657 460 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Pkp1P97350 728 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 G3bp2P97379 482 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tfdp1Q08639 410 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 OtulinQ3UCV8 352 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Clhc1Q5M6W3 596 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Zbtb17Q60821 794 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ccdc169Q8BXX9 214 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Tceanc2Q8R2M0 207 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Hip1Q8VD75 1029 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 ParnQ8VDG3 624 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Slc35f6Q8VE96 372 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 MtrexQ9CZU3 1040 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Pms2P54279 859 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Baiap3Q80TT2 1134 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ppp4r1Q8K2V1 951 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Fam84aQ9D650 292 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ccdc22Q9JIG7 627 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Gpaa1Q9WTK3 621 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Nav1Q8CH77 1875 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Pfkfb3A7UAK5 555 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Klhl23Q6GQU2 558 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Smap1Q91VZ6 440 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 YarsQ91WQ3 528 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Usp14Q9JMA1 493 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Peg12Q9WVA7 283 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ttc30a2A2AKQ8 664 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Calb1P12658 261 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Gucy2fQ5SDA5 1108 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 ThrspQ62264 150 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Gpbp1Q6NXH3 473 aaKnown RBP4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ckap2lQ7TS74 745 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Abhd8Q8R0P8 439 aa4.88□□□□□ -1.63
Prkdc-201ENSMUST00000023352 Ttc30a1Q99J38 664 aa4.88□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms