RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Fam161bQ8CB59 589 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Stxbp5Q8K400 1152 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 HdlbpQ8VDJ3 1268 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rfc4Q99J62 364 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Atp5dQ9D3D9 168 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Spag6Q9JLI7 507 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Akt3Q9WUA6 479 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 ArcQ9WV31 396 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm28961A0A087WPA5 222 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm21858A0A087WQ24 222 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pkp1P97350 728 aaKnown RBP9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ptgs2Q05769 604 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Sv2cQ69ZS6 727 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Creb3l3Q91XE9 479 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Adi1Q99JT9 179 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tmem192Q9CXT7 266 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ing2Q9ESK4 281 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 PodxlQ9R0M4 503 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ppef2O35385 757 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 E2f6O54917 272 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Slc1a1P51906 523 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Idi1P58044 227 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Msx3P70354 204 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Atp1b3P97370 278 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cep126Q0VBV7 1103 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Atp6v0d2Q80SY3 350 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Terb1Q8C0V1 768 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pus7lQ8CE46 702 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Naa30Q8CES0 364 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Taco1Q8K0Z7 294 aaKnown RBP9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 1700016D06RikQ9DAA5 166 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Kif21aQ9QXL2 1672 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Plekhg4A0A1L1SU27 1217 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Apol8A2VDH7 339 aaKnown RBP9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pms2P54279 859 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pcgf5Q3UK78 256 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Znrd1-asQ8R0E5 213 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tut1Q8R3F9 869 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ncoa5Q91W39 579 aaKnown RBP9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pcyt1aP49586 367 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dnajc5P60904 198 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 YwhahP68510 246 aaKnown RBP9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Trim35Q8C006 501 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Wdr27Q8C5V5 780 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tmem132cQ8CEF9 1099 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Bud13Q8R149 637 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cgref1Q8R1U2 281 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ddx39aQ8VDW0 427 aaKnown RBP9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cnbd2Q9D5U8 673 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 C1qtnf1Q9QXP7 281 aa9.78□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Trpm2Q91YD4 1506 aa9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Myo1dQ5SYD0 1006 aa9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zfp418Q8BFS8 652 aa9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Arfip2Q8K221 341 aa9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 TrabdQ99JY4 376 aa9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cnot8Q9D8X5 292 aa9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Twf2Q9Z0P5 349 aaKnown RBP9.77□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm10250G3X9L6 160 aaKnown RBP9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PtprcP06800 1291 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tph1P17532 447 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gpr182P43142 395 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 IqcmQ149I8 489 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tbc1d1Q60949 1255 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 FcgrtQ61559 365 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pcdhb14Q6PB90 796 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rhot1Q8BG51 631 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fbxl5Q8C2S5 690 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fam160b1Q8CDM8 764 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 LzicQ8K3C3 190 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Cadm1Q8R5M8 456 aaKnown RBP9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dnajc17Q91WT4 303 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ces1fQ91WU0 561 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Snf8Q9CZ28 258 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Atp5hQ9DCX2 161 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rrbp1Q99PL5 1605 aaKnown RBP9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tcp11x2A2AEI7 503 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lrriq4A6H6A4 596 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Zfp266E9Q2S7 604 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm20721E9Q2U8 318 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Kif23E9Q5G3 953 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Hspa4lP48722 838 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Mif4gdQ3UBZ5 222 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PRAG1Q571I4 1179 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Serpinb6Q60854 378 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ptk6Q64434 451 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ap1s3Q7TN05 154 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rassf6Q80UQ2 353 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Znf467Q8JZL0 594 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Defb15Q8R2I5 79 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 MlphQ91V27 590 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 EpgnQ924X1 152 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tgm5Q9D7I9 724 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pole3Q9JKP7 145 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Mroh6V9GX81 722 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Kdm5cP41230 1554 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 6030498E09RikB1AX85 169 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dynlt1P51807 113 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 EmsyQ8BMB0 1264 aaKnown RBP9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Wdr35Q8BND3 1181 aa9.77□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lsm14bQ8CGC4 385 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms