RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W DPB2P24482 689 aaPredicted RBP1.85□□□□□ -2.11
CFT2YLR115W FAA1P30624 700 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W SRB5P32585 307 aa1.85□□□□□ -2.11
CFT2YLR115W SSE2P32590 693 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W PAD1P33751 242 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
CFT2YLR115W SWC5P38326 303 aa1.85□□□□□ -2.11
CFT2YLR115W TAE1P38340 232 aa1.85□□□□□ -2.11
CFT2YLR115W MSR1P38714 643 aa1.85□□□□□ -2.11
CFT2YLR115W YER085CP40058 173 aa1.85□□□□□ -2.11
CFT2YLR115W BUR6P40096 142 aa1.85□□□□□ -2.11
CFT2YLR115W YIL060WP40519 144 aa1.85□□□□□ -2.11
CFT2YLR115W SGN1P40561 250 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
CFT2YLR115W SNZ3P43545 298 aa1.85□□□□□ -2.11
CFT2YLR115W DIA3P52290 468 aa1.85□□□□□ -2.11
CFT2YLR115W YIP5P53108 310 aa1.85□□□□□ -2.11
CFT2YLR115W LSG1P53145 640 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W SNZ2P53824 298 aa1.85□□□□□ -2.11
CFT2YLR115W RPM2Q02773 1202 aa1.85□□□□□ -2.11
CFT2YLR115W PRM15Q03262 622 aa1.85□□□□□ -2.11
CFT2YLR115W RSN1Q03516 953 aa1.85□□□□□ -2.11
CFT2YLR115W YMR310CQ04867 317 aaPredicted RBP1.85□□□□□ -2.11
CFT2YLR115W DCS1Q06151 350 aa1.85□□□□□ -2.11
CFT2YLR115W CUR1Q06469 252 aa1.85□□□□□ -2.11
CFT2YLR115W YLL007CQ07799 665 aa1.85□□□□□ -2.11
CFT2YLR115W ATG9Q12142 997 aa1.85□□□□□ -2.11
CFT2YLR115W YRA1Q12159 226 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W YBL111CQ3E7Y5 667 aa1.85□□□□□ -2.11
CFT2YLR115W AI5_BETAQ9ZZX0 354 aa1.85□□□□□ -2.11
CFT2YLR115W ARD1P07347 238 aaPredicted RBP1.84□□□□□ -2.11
CFT2YLR115W RPL27AP0C2H6 136 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W RPL27BP0C2H7 136 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W PEP5P12868 1029 aa1.84□□□□□ -2.11
CFT2YLR115W KRS1P15180 591 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W CKA2P19454 339 aa1.84□□□□□ -2.11
CFT2YLR115W KGD1P20967 1014 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W SOF1P33750 489 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W TCD2P36101 447 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W NUP133P36161 1157 aa1.84□□□□□ -2.11
CFT2YLR115W RFC3P38629 340 aa1.84□□□□□ -2.11
CFT2YLR115W SCC4P40090 624 aa1.84□□□□□ -2.11
CFT2YLR115W RFC4P40339 323 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W PTR3P43606 678 aa1.84□□□□□ -2.11
CFT2YLR115W RPS7BP48164 190 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W IMD4P50094 524 aaKnown RBP1.84□□□□□ -2.11
CFT2YLR115W KAP114P53067 1004 aa1.84□□□□□ -2.11
CFT2YLR115W MPS2P53159 387 aa1.84□□□□□ -2.11
CFT2YLR115W YGR127WP53275 312 aa1.84□□□□□ -2.11
CFT2YLR115W SSU72P53538 206 aaPredicted RBP1.84□□□□□ -2.11
CFT2YLR115W YNL234WP53857 426 aa1.84□□□□□ -2.11
CFT2YLR115W SPO19Q03029 223 aa1.84□□□□□ -2.11
CFT2YLR115W ACL4Q03771 387 aa1.84□□□□□ -2.11
CFT2YLR115W SIL1Q08199 421 aa1.84□□□□□ -2.11
CFT2YLR115W UAF30Q08747 228 aa1.84□□□□□ -2.11
CFT2YLR115W MTR10Q99189 972 aa1.84□□□□□ -2.11
CFT2YLR115W ARG81P05085 880 aa1.84□□□□□ -2.12
CFT2YLR115W ARG80P07249 177 aa1.84□□□□□ -2.12
CFT2YLR115W MRS3P10566 314 aa1.84□□□□□ -2.12
CFT2YLR115W SCH9P11792 824 aaKnown RBP1.84□□□□□ -2.12
CFT2YLR115W GAL3P13045 520 aa1.84□□□□□ -2.12
CFT2YLR115W SPE2P21182 396 aa1.84□□□□□ -2.12
CFT2YLR115W RIM1P32445 135 aaKnown RBP1.84□□□□□ -2.12
CFT2YLR115W HXT1P32465 570 aa1.84□□□□□ -2.12
CFT2YLR115W HXT3P32466 567 aaKnown RBP1.84□□□□□ -2.12
CFT2YLR115W LOS1P33418 1100 aaPredicted RBP1.84□□□□□ -2.12
CFT2YLR115W RIM2P38127 377 aa1.84□□□□□ -2.12
CFT2YLR115W KRE9P39005 276 aa1.84□□□□□ -2.12
CFT2YLR115W YER130CP39959 443 aa1.84□□□□□ -2.12
CFT2YLR115W OTU1P43558 301 aa1.84□□□□□ -2.12
CFT2YLR115W GUF1P46943 645 aa1.84□□□□□ -2.12
CFT2YLR115W RMR1P53060 241 aa1.84□□□□□ -2.12
CFT2YLR115W INN1P53901 409 aa1.84□□□□□ -2.12
CFT2YLR115W KTR6P54070 446 aa1.84□□□□□ -2.12
CFT2YLR115W SLT2Q00772 484 aa1.84□□□□□ -2.12
CFT2YLR115W CAB5Q03941 241 aa1.84□□□□□ -2.12
CFT2YLR115W APC4Q04601 652 aa1.84□□□□□ -2.12
CFT2YLR115W ERV41Q04651 352 aa1.84□□□□□ -2.12
CFT2YLR115W RRG8Q06109 277 aa1.84□□□□□ -2.12
CFT2YLR115W RLM1Q12224 676 aa1.84□□□□□ -2.12
CFT2YLR115W DCP1Q12517 231 aaPredicted RBP1.84□□□□□ -2.12
CFT2YLR115W MHP1P43638 1398 aa1.84□□□□□ -2.12
CFT2YLR115W TEF1P02994 458 aaKnown RBP1.83□□□□□ -2.12
CFT2YLR115W RPS3P05750 240 aaKnown RBP1.83□□□□□ -2.12
CFT2YLR115W SPS4P09937 338 aa1.83□□□□□ -2.12
CFT2YLR115W PMR1P13586 950 aa1.83□□□□□ -2.12
CFT2YLR115W PRP16P15938 1071 aaPredicted RBP1.83□□□□□ -2.12
CFT2YLR115W COQ1P18900 473 aa1.83□□□□□ -2.12
CFT2YLR115W RPL24BP24000 155 aaKnown RBP1.83□□□□□ -2.12
CFT2YLR115W CSM1P25651 190 aa1.83□□□□□ -2.12
CFT2YLR115W RML2P32611 393 aa1.83□□□□□ -2.12
CFT2YLR115W YOX1P34161 385 aa1.83□□□□□ -2.12
CFT2YLR115W RSM22P36056 628 aa1.83□□□□□ -2.12
CFT2YLR115W ICS2P38284 255 aa1.83□□□□□ -2.12
CFT2YLR115W PHO90P39535 881 aa1.83□□□□□ -2.12
CFT2YLR115W SEC72P39742 193 aaKnown RBP1.83□□□□□ -2.12
CFT2YLR115W SEC24P40482 926 aaKnown RBP1.83□□□□□ -2.12
CFT2YLR115W SNL1P40548 159 aa1.83□□□□□ -2.12
CFT2YLR115W HIT1P46973 164 aa1.83□□□□□ -2.12
CFT2YLR115W MRX5P47007 382 aa1.83□□□□□ -2.12
CFT2YLR115W LOH1P47055 219 aa1.83□□□□□ -2.12
CFT2YLR115W COS5P47187 383 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms