RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W DCR2Q05924 578 aa4.74□□□□□ -1.65
LDB18YLL049W RIF2Q06208 395 aa4.74□□□□□ -1.65
LDB18YLL049W YPR091CQ06833 770 aa4.74□□□□□ -1.65
LDB18YLL049W YDL121CQ07541 149 aa4.74□□□□□ -1.65
LDB18YLL049W GEP5Q12393 293 aa4.74□□□□□ -1.65
LDB18YLL049W DET1Q99288 334 aaKnown RBP4.74□□□□□ -1.65
LDB18YLL049W CMD1P06787 147 aaKnown RBP4.73□□□□□ -1.65
LDB18YLL049W ART10P18634 518 aaKnown RBP4.73□□□□□ -1.65
LDB18YLL049W YAP1P19880 650 aaKnown RBP4.73□□□□□ -1.65
LDB18YLL049W MSN2P33748 704 aa4.73□□□□□ -1.65
LDB18YLL049W MRPS5P33759 307 aa4.73□□□□□ -1.65
LDB18YLL049W MNN2P38069 597 aa4.73□□□□□ -1.65
LDB18YLL049W FES1P38260 290 aa4.73□□□□□ -1.65
LDB18YLL049W ARN2P38724 620 aa4.73□□□□□ -1.65
LDB18YLL049W SEC9P40357 651 aa4.73□□□□□ -1.65
LDB18YLL049W PSA1P41940 361 aaKnown RBP4.73□□□□□ -1.65
LDB18YLL049W NMD5P46970 1048 aa4.73□□□□□ -1.65
LDB18YLL049W TOM22P49334 152 aa4.73□□□□□ -1.65
LDB18YLL049W RPL22BP56628 122 aaKnown RBP4.73□□□□□ -1.65
LDB18YLL049W UTP6Q02354 440 aaKnown RBP4.73□□□□□ -1.65
LDB18YLL049W YHR214C-DP0CX93 97 aa4.72□□□□□ -1.65
LDB18YLL049W ARF1P11076 181 aaKnown RBP4.72□□□□□ -1.65
LDB18YLL049W GAL3P13045 520 aa4.72□□□□□ -1.65
LDB18YLL049W AMD2P22580 549 aa4.72□□□□□ -1.65
LDB18YLL049W CWH43P25618 953 aa4.72□□□□□ -1.65
LDB18YLL049W YEF1P32622 495 aa4.72□□□□□ -1.65
LDB18YLL049W PRS3P38689 320 aaKnown RBP4.72□□□□□ -1.65
LDB18YLL049W NDC80P40460 691 aa4.72□□□□□ -1.65
LDB18YLL049W AVT7P40501 490 aa4.72□□□□□ -1.65
LDB18YLL049W NIT2P47016 307 aa4.72□□□□□ -1.65
LDB18YLL049W KEL2P50090 882 aa4.72□□□□□ -1.65
LDB18YLL049W YGR066CP53242 292 aa4.72□□□□□ -1.65
LDB18YLL049W TPC1P53257 314 aa4.72□□□□□ -1.65
LDB18YLL049W IGO1P53897 168 aa4.72□□□□□ -1.65
LDB18YLL049W UBX4P54730 416 aa4.72□□□□□ -1.65
LDB18YLL049W RPM2Q02773 1202 aa4.72□□□□□ -1.65
LDB18YLL049W SDC1Q03323 175 aa4.72□□□□□ -1.65
LDB18YLL049W CSN9Q03981 162 aa4.72□□□□□ -1.65
LDB18YLL049W SWF1Q04629 336 aa4.72□□□□□ -1.65
LDB18YLL049W PAL1Q05518 499 aaKnown RBP4.72□□□□□ -1.65
LDB18YLL049W TY1A-NL1Q12391 440 aaKnown RBP4.72□□□□□ -1.65
LDB18YLL049W ZRT2Q12436 422 aa4.72□□□□□ -1.65
LDB18YLL049W RRP36Q12481 300 aaPredicted RBP4.72□□□□□ -1.65
LDB18YLL049W SPO24Q3E752 67 aa4.72□□□□□ -1.65
LDB18YLL049W YCL012CQ8J0M4 134 aa4.72□□□□□ -1.65
LDB18YLL049W HEM2P05373 342 aa4.71□□□□□ -1.66
LDB18YLL049W RPL15AP05748 204 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W PET111P08468 800 aa4.71□□□□□ -1.66
LDB18YLL049W RPB2P08518 1224 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W BAR1P12630 587 aa4.71□□□□□ -1.66
LDB18YLL049W AIM17P23180 465 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W IDH2P28241 369 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W APD1P38281 316 aa4.71□□□□□ -1.66
LDB18YLL049W IES5P40060 125 aa4.71□□□□□ -1.66
LDB18YLL049W GPP2P40106 250 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W PRE6P40303 254 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W UPF3P48412 387 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W CWC22P53333 577 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W RPL15BP54780 204 aaPredicted RBP4.71□□□□□ -1.66
LDB18YLL049W HPT1Q04178 221 aaKnown RBP4.71□□□□□ -1.66
LDB18YLL049W YMR111CQ04461 462 aaPredicted RBP4.71□□□□□ -1.66
LDB18YLL049W MSA1Q08471 629 aa4.71□□□□□ -1.66
LDB18YLL049W RMP1Q12530 201 aa4.71□□□□□ -1.66
LDB18YLL049W GCY1P14065 312 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
LDB18YLL049W AAC3P18238 307 aa4.7□□□□□ -1.66
LDB18YLL049W PAP1P29468 568 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W IME2P32581 645 aa4.7□□□□□ -1.66
LDB18YLL049W RPS1AP33442 255 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W VPS51P36116 164 aa4.7□□□□□ -1.66
LDB18YLL049W YKR073CP36153 106 aa4.7□□□□□ -1.66
LDB18YLL049W CCZ1P38273 704 aa4.7□□□□□ -1.66
LDB18YLL049W CCT2P39076 527 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W ALG5P40350 334 aa4.7□□□□□ -1.66
LDB18YLL049W REE1P40893 198 aa4.7□□□□□ -1.66
LDB18YLL049W GCD10P41814 478 aa4.7□□□□□ -1.66
LDB18YLL049W GDS1P41913 522 aa4.7□□□□□ -1.66
LDB18YLL049W MAD3P47074 515 aa4.7□□□□□ -1.66
LDB18YLL049W RNR4P49723 345 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W YPT32P51996 222 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W EFM5P53200 248 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W YNR068CP53754 272 aa4.7□□□□□ -1.66
LDB18YLL049W ASI1P54074 624 aa4.7□□□□□ -1.66
LDB18YLL049W RMI1Q02685 241 aa4.7□□□□□ -1.66
LDB18YLL049W VAC14Q06708 880 aa4.7□□□□□ -1.66
LDB18YLL049W COS7Q07788 383 aa4.7□□□□□ -1.66
LDB18YLL049W YLR040CQ07988 224 aa4.7□□□□□ -1.66
LDB18YLL049W AHA1Q12449 350 aaKnown RBP4.7□□□□□ -1.66
LDB18YLL049W PSF1Q12488 208 aa4.7□□□□□ -1.66
LDB18YLL049W NKP1Q12493 238 aa4.7□□□□□ -1.66
LDB18YLL049W GAL1P04385 528 aa4.69□□□□□ -1.66
LDB18YLL049W CTA1P15202 515 aa4.69□□□□□ -1.66
LDB18YLL049W HEM15P16622 393 aa4.69□□□□□ -1.66
LDB18YLL049W MCK1P21965 375 aaKnown RBP4.69□□□□□ -1.66
LDB18YLL049W PTP2P29461 750 aa4.69□□□□□ -1.66
LDB18YLL049W RPC82P32349 654 aa4.69□□□□□ -1.66
LDB18YLL049W NIC96P34077 839 aa4.69□□□□□ -1.66
LDB18YLL049W ASK1P35734 292 aa4.69□□□□□ -1.66
LDB18YLL049W SET3P36124 751 aa4.69□□□□□ -1.66
LDB18YLL049W AST2P39945 430 aaKnown RBP4.69□□□□□ -1.66
LDB18YLL049W RET2P43621 546 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms