RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YML003WP0CF16 290 aa5.24□□□□□ -1.57
FOB1YDR110W SSC1P0CS90 654 aaKnown RBP5.24□□□□□ -1.57
FOB1YDR110W ASP3-2P0CX77 362 aa5.24□□□□□ -1.57
FOB1YDR110W ASP3-3P0CX78 362 aa5.24□□□□□ -1.57
FOB1YDR110W ASP3-4P0CX79 362 aa5.24□□□□□ -1.57
FOB1YDR110W ASP3-1P0CZ17 362 aa5.24□□□□□ -1.57
FOB1YDR110W RPO26P20435 155 aa5.24□□□□□ -1.57
FOB1YDR110W CHA1P25379 360 aaKnown RBP5.24□□□□□ -1.57
FOB1YDR110W ERG9P29704 444 aa5.24□□□□□ -1.57
FOB1YDR110W PDB1P32473 366 aaKnown RBP5.24□□□□□ -1.57
FOB1YDR110W TCA17P32613 152 aa5.24□□□□□ -1.57
FOB1YDR110W CLG1P35190 452 aa5.24□□□□□ -1.57
FOB1YDR110W GPI16P38875 610 aa5.24□□□□□ -1.57
FOB1YDR110W SRP14P38985 146 aa5.24□□□□□ -1.57
FOB1YDR110W ACO2P39533 789 aa5.24□□□□□ -1.57
FOB1YDR110W ECM10P39987 644 aa5.24□□□□□ -1.57
FOB1YDR110W YIR016WP40572 265 aa5.24□□□□□ -1.57
FOB1YDR110W MRX5P47007 382 aa5.24□□□□□ -1.57
FOB1YDR110W GET1P53192 235 aa5.24□□□□□ -1.57
FOB1YDR110W SHY1P53266 389 aa5.24□□□□□ -1.57
FOB1YDR110W ALG11P53954 548 aaKnown RBP5.24□□□□□ -1.57
FOB1YDR110W ASI1P54074 624 aa5.24□□□□□ -1.57
FOB1YDR110W YDR541CQ03049 344 aa5.24□□□□□ -1.57
FOB1YDR110W DIS3Q08162 1001 aaKnown RBP5.24□□□□□ -1.57
FOB1YDR110W TRM11Q12463 433 aa5.24□□□□□ -1.57
FOB1YDR110W YPR015CQ12531 247 aa5.24□□□□□ -1.57
FOB1YDR110W HIS3P06633 220 aa5.23□□□□□ -1.57
FOB1YDR110W CDC4P07834 779 aa5.23□□□□□ -1.57
FOB1YDR110W ERG11P10614 530 aa5.23□□□□□ -1.57
FOB1YDR110W SAC7P17121 654 aa5.23□□□□□ -1.57
FOB1YDR110W DBF2P22204 572 aa5.23□□□□□ -1.57
FOB1YDR110W AAT2P23542 418 aaKnown RBP5.23□□□□□ -1.57
FOB1YDR110W TYE7P33122 291 aaPredicted RBP5.23□□□□□ -1.57
FOB1YDR110W MCH2P36032 473 aa5.23□□□□□ -1.57
FOB1YDR110W ECM8P38246 354 aa5.23□□□□□ -1.57
FOB1YDR110W YHI9P38765 294 aa5.23□□□□□ -1.57
FOB1YDR110W YHR177WP38867 453 aa5.23□□□□□ -1.57
FOB1YDR110W MMF1P40185 145 aaKnown RBP5.23□□□□□ -1.57
FOB1YDR110W GID8P40208 455 aa5.23□□□□□ -1.57
FOB1YDR110W RTS2P40962 232 aa5.23□□□□□ -1.57
FOB1YDR110W BAP3P41815 604 aa5.23□□□□□ -1.57
FOB1YDR110W COS4P43542 379 aa5.23□□□□□ -1.57
FOB1YDR110W NPA3P47122 385 aa5.23□□□□□ -1.57
FOB1YDR110W GCV1P48015 400 aa5.23□□□□□ -1.57
FOB1YDR110W SPT20P50875 604 aa5.23□□□□□ -1.57
FOB1YDR110W OKP1P53298 406 aa5.23□□□□□ -1.57
FOB1YDR110W MPS1P54199 764 aa5.23□□□□□ -1.57
FOB1YDR110W APM1Q00776 475 aaPredicted RBP5.23□□□□□ -1.57
FOB1YDR110W DYN3Q04949 312 aa5.23□□□□□ -1.57
FOB1YDR110W RSA3Q05942 220 aaKnown RBP5.23□□□□□ -1.57
FOB1YDR110W ACK1Q07622 623 aaPredicted RBP5.23□□□□□ -1.57
FOB1YDR110W SOG2Q08817 791 aa5.23□□□□□ -1.57
FOB1YDR110W ALG6Q12001 544 aaKnown RBP5.23□□□□□ -1.57
FOB1YDR110W MED2Q12124 431 aa5.23□□□□□ -1.57
FOB1YDR110W RPN6Q12377 434 aa5.23□□□□□ -1.57
FOB1YDR110W MRP10O75012 95 aa5.23□□□□□ -1.57
FOB1YDR110W PUT2P07275 575 aa5.23□□□□□ -1.57
FOB1YDR110W PMR1P13586 950 aa5.23□□□□□ -1.57
FOB1YDR110W POX1P13711 748 aa5.23□□□□□ -1.57
FOB1YDR110W RAD57P25301 460 aa5.23□□□□□ -1.57
FOB1YDR110W RFA3P26755 122 aaKnown RBP5.23□□□□□ -1.57
FOB1YDR110W RPC34P32910 317 aa5.23□□□□□ -1.57
FOB1YDR110W YHR122WP38829 231 aa5.23□□□□□ -1.57
FOB1YDR110W YJL206CP39529 758 aa5.23□□□□□ -1.57
FOB1YDR110W SEO1P39709 593 aa5.23□□□□□ -1.57
FOB1YDR110W DSE1P40077 573 aa5.23□□□□□ -1.57
FOB1YDR110W YNL195CP40168 261 aa5.23□□□□□ -1.57
FOB1YDR110W SDP1P40479 209 aa5.23□□□□□ -1.57
FOB1YDR110W AMA1P50082 593 aa5.23□□□□□ -1.57
FOB1YDR110W NQM1P53228 333 aaPredicted RBP5.23□□□□□ -1.57
FOB1YDR110W GND2P53319 492 aa5.23□□□□□ -1.57
FOB1YDR110W MTG1Q03151 367 aaPredicted RBP5.23□□□□□ -1.57
FOB1YDR110W YMR160WQ03823 816 aa5.23□□□□□ -1.57
FOB1YDR110W YMR114CQ04471 368 aaKnown RBP5.23□□□□□ -1.57
FOB1YDR110W YMR310CQ04867 317 aaPredicted RBP5.23□□□□□ -1.57
FOB1YDR110W PYC1P11154 1178 aaKnown RBP5.22□□□□□ -1.57
FOB1YDR110W CLN3P13365 580 aa5.22□□□□□ -1.57
FOB1YDR110W SNF5P18480 905 aa5.22□□□□□ -1.57
FOB1YDR110W YMR31P19955 123 aa5.22□□□□□ -1.57
FOB1YDR110W RNR3P21672 869 aaKnown RBP5.22□□□□□ -1.57
FOB1YDR110W CDC13P32797 924 aaKnown RBP5.22□□□□□ -1.57
FOB1YDR110W SPT10P35208 640 aa5.22□□□□□ -1.57
FOB1YDR110W RTC2P38279 296 aa5.22□□□□□ -1.57
FOB1YDR110W YHL012WP38709 493 aa5.22□□□□□ -1.57
FOB1YDR110W UBA4P38820 440 aa5.22□□□□□ -1.57
FOB1YDR110W CRG1P38892 291 aaRIP-Chip data5.22□□□□□ -1.57not detected
FOB1YDR110W SPG5P42933 373 aa5.22□□□□□ -1.57
FOB1YDR110W YFR057WP43625 151 aa5.22□□□□□ -1.57
FOB1YDR110W SCD6P45978 349 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
FOB1YDR110W TAX4P47030 604 aa5.22□□□□□ -1.57
FOB1YDR110W RPC17P47076 161 aa5.22□□□□□ -1.57
FOB1YDR110W ARI1P53111 347 aaKnown RBP5.22□□□□□ -1.57
FOB1YDR110W MTL1P53214 551 aa5.22□□□□□ -1.57
FOB1YDR110W YTP1P53584 459 aa5.22□□□□□ -1.57
FOB1YDR110W MRPL50P53724 139 aa5.22□□□□□ -1.57
FOB1YDR110W KTR5P53966 522 aaPredicted RBP5.22□□□□□ -1.57
FOB1YDR110W ARG5,6Q01217 863 aa5.22□□□□□ -1.57
FOB1YDR110W UBX2Q04228 584 aa5.22□□□□□ -1.57
FOB1YDR110W YLR053CQ12026 108 aa5.22□□□□□ -1.57
FOB1YDR110W DAS2Q12084 232 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms