RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C YLR456WQ06199 204 aa2.55□□□□□ -2
UBX3YDL091C NSE1Q07913 336 aa2.55□□□□□ -2
UBX3YDL091C SMC5Q08204 1093 aa2.55□□□□□ -2
UBX3YDL091C PAR32Q12515 295 aaKnown RBP2.55□□□□□ -2
UBX3YDL091C SKI3P17883 1432 aaKnown RBP2.55□□□□□ -2
UBX3YDL091C ATP1P07251 545 aaKnown RBP2.54□□□□□ -2
UBX3YDL091C CAP2P13517 287 aa2.54□□□□□ -2
UBX3YDL091C SLM5P25345 492 aaKnown RBP2.54□□□□□ -2
UBX3YDL091C ANR2P36090 516 aaPredicted RBP2.54□□□□□ -2
UBX3YDL091C YBL028CP38202 106 aa2.54□□□□□ -2
UBX3YDL091C OM14P38325 134 aa2.54□□□□□ -2
UBX3YDL091C YHK8P38776 514 aa2.54□□□□□ -2
UBX3YDL091C WSS1P38838 269 aa2.54□□□□□ -2
UBX3YDL091C SER3P40054 469 aa2.54□□□□□ -2
UBX3YDL091C MMF1P40185 145 aaKnown RBP2.54□□□□□ -2
UBX3YDL091C SEC28P40509 296 aaKnown RBP2.54□□□□□ -2
UBX3YDL091C TOS3P43637 560 aa2.54□□□□□ -2
UBX3YDL091C AIM24P47127 394 aa2.54□□□□□ -2
UBX3YDL091C CRH1P53301 507 aa2.54□□□□□ -2
UBX3YDL091C YMR102CQ03177 834 aa2.54□□□□□ -2
UBX3YDL091C VHS1Q03785 461 aa2.54□□□□□ -2
UBX3YDL091C YET2Q04210 160 aa2.54□□□□□ -2
UBX3YDL091C UAF30Q08747 228 aa2.54□□□□□ -2
UBX3YDL091C RPN5Q12250 445 aaKnown RBP2.54□□□□□ -2
UBX3YDL091C YDR061WQ12298 539 aa2.54□□□□□ -2
UBX3YDL091C NCA2Q12374 616 aa2.54□□□□□ -2
UBX3YDL091C HTZ1Q12692 134 aaKnown RBP2.54□□□□□ -2
UBX3YDL091C ALG1P16661 449 aa2.53□□□□□ -2
UBX3YDL091C PHO91P27514 894 aa2.53□□□□□ -2
UBX3YDL091C SEO1P39709 593 aa2.53□□□□□ -2
UBX3YDL091C MAM33P40513 266 aa2.53□□□□□ -2
UBX3YDL091C EGT2P42835 1041 aa2.53□□□□□ -2
UBX3YDL091C LCB3P47013 409 aa2.53□□□□□ -2
UBX3YDL091C YDR541CQ03049 344 aa2.53□□□□□ -2
UBX3YDL091C TDA1Q03533 586 aa2.53□□□□□ -2
UBX3YDL091C LIP2Q06005 328 aa2.53□□□□□ -2
UBX3YDL091C LOT6Q07923 191 aa2.53□□□□□ -2
UBX3YDL091C DNL4Q08387 944 aaPredicted RBP2.53□□□□□ -2
UBX3YDL091C COX4P04037 155 aa2.52□□□□□ -2.01
UBX3YDL091C RPL1AP0CX43 217 aaKnown RBP2.52□□□□□ -2.01
UBX3YDL091C RPL1BP0CX44 217 aaKnown RBP2.52□□□□□ -2.01
UBX3YDL091C CDC50P25656 391 aa2.52□□□□□ -2.01
UBX3YDL091C DOA1P36037 715 aa2.52□□□□□ -2.01
UBX3YDL091C HEL1P36113 551 aa2.52□□□□□ -2.01
UBX3YDL091C INM1P38710 295 aa2.52□□□□□ -2.01
UBX3YDL091C ALD5P40047 520 aaKnown RBP2.52□□□□□ -2.01
UBX3YDL091C YER186CP40101 306 aa2.52□□□□□ -2.01
UBX3YDL091C PAC11P40960 533 aa2.52□□□□□ -2.01
UBX3YDL091C HAC1P41546 238 aa2.52□□□□□ -2.01
UBX3YDL091C EPL1P43572 832 aa2.52□□□□□ -2.01
UBX3YDL091C CLD1P53264 445 aa2.52□□□□□ -2.01
UBX3YDL091C EOS1P53938 366 aa2.52□□□□□ -2.01
UBX3YDL091C SPR6Q01684 191 aa2.52□□□□□ -2.01
UBX3YDL091C MEH1Q02205 184 aa2.52□□□□□ -2.01
UBX3YDL091C MRPS16Q02608 121 aa2.52□□□□□ -2.01
UBX3YDL091C GRX3Q03835 250 aa2.52□□□□□ -2.01
UBX3YDL091C YDR341CQ05506 607 aaKnown RBP2.52□□□□□ -2.01
UBX3YDL091C EAF3Q12432 401 aa2.52□□□□□ -2.01
UBX3YDL091C SRN2Q99176 213 aa2.52□□□□□ -2.01
UBX3YDL091C PSK1P31374 1356 aa2.52□□□□□ -2.01
UBX3YDL091C ARO3P14843 370 aaKnown RBP2.51□□□□□ -2.01
UBX3YDL091C SWI3P32591 825 aa2.51□□□□□ -2.01
UBX3YDL091C SKN1P33336 771 aa2.51□□□□□ -2.01
UBX3YDL091C MRPS9P38120 278 aa2.51□□□□□ -2.01
UBX3YDL091C STN1P38960 494 aa2.51□□□□□ -2.01
UBX3YDL091C ATM1P40416 690 aa2.51□□□□□ -2.01
UBX3YDL091C CHS6P40955 746 aa2.51□□□□□ -2.01
UBX3YDL091C ROG1P53118 685 aa2.51□□□□□ -2.01
UBX3YDL091C RRP46P53256 223 aaPredicted RBP2.51□□□□□ -2.01
UBX3YDL091C YMR010WQ03687 405 aa2.51□□□□□ -2.01
UBX3YDL091C PRM6Q04705 352 aa2.51□□□□□ -2.01
UBX3YDL091C YPQ1Q12010 308 aa2.51□□□□□ -2.01
UBX3YDL091C TCB3Q03640 1545 aaKnown RBP2.5□□□□□ -2.01
UBX3YDL091C PIS1P06197 220 aaKnown RBP2.5□□□□□ -2.01
UBX3YDL091C CBP6P07253 162 aaPredicted RBP2.5□□□□□ -2.01
UBX3YDL091C ARF1P11076 181 aaKnown RBP2.5□□□□□ -2.01
UBX3YDL091C DAL5P15365 543 aa2.5□□□□□ -2.01
UBX3YDL091C IES6P32617 166 aa2.5□□□□□ -2.01
UBX3YDL091C NRP1P32770 719 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
UBX3YDL091C CBF5P33322 483 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
UBX3YDL091C PFF1P38244 976 aa2.5□□□□□ -2.01
UBX3YDL091C RXT2P38255 430 aa2.5□□□□□ -2.01
UBX3YDL091C EFM4P40516 257 aa2.5□□□□□ -2.01
UBX3YDL091C PGU1P47180 361 aa2.5□□□□□ -2.01
UBX3YDL091C ASN2P49090 572 aaKnown RBP2.5□□□□□ -2.01
UBX3YDL091C MLC1P53141 149 aa2.5□□□□□ -2.01
UBX3YDL091C MKC7P53379 596 aa2.5□□□□□ -2.01
UBX3YDL091C TRM112P53738 135 aaPredicted RBP2.5□□□□□ -2.01
UBX3YDL091C MFG1Q07684 458 aa2.5□□□□□ -2.01
UBX3YDL091C NAG1Q8TGN9 163 aa2.5□□□□□ -2.01
UBX3YDL091C PUP2P32379 260 aa2.49□□□□□ -2.01
UBX3YDL091C YEF1P32622 495 aa2.49□□□□□ -2.01
UBX3YDL091C RAD5P32849 1169 aaPredicted RBP2.49□□□□□ -2.01
UBX3YDL091C SKT5P34226 696 aa2.49□□□□□ -2.01
UBX3YDL091C YKL097CP34245 136 aa2.49□□□□□ -2.01
UBX3YDL091C SEC27P41811 889 aaKnown RBP2.49□□□□□ -2.01
UBX3YDL091C YPS5P53057 165 aa2.49□□□□□ -2.01
UBX3YDL091C ECM11Q04110 302 aa2.49□□□□□ -2.01
UBX3YDL091C NDL1Q06568 189 aa2.49□□□□□ -2.01
UBX3YDL091C AAD15Q08361 143 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms