RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 RPLP2P05387 115 aaKnown RBP16.99■□□□□ 0.31
PHGDH-231ENST00000641939 RABGGTBP53611 331 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 WDR5P61964 334 aaKnown RBP16.99■□□□□ 0.31
PHGDH-231ENST00000641939 TRIM29Q14134 588 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 IKBKEQ14164 716 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 RABEP1Q15276 862 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 PLEKHG4Q58EX7 1191 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 TRAPPC12Q8WVT3 735 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 DNAJB3Q8WWF6 145 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
PHGDH-231ENST00000641939 ZNF576Q9H609 170 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 GABBR1Q9UBS5 961 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 PCDHA11Q9Y5I1 949 aa16.99■□□□□ 0.31
PHGDH-231ENST00000641939 MAFBQ9Y5Q3 323 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-231ENST00000641939 PSMD10O75832 226 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 MMP1P03956 469 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
PHGDH-231ENST00000641939 ATP4AP20648 1035 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 SFNP31947 248 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 JAK3P52333 1124 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 FOSBP53539 338 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 NR5A1Q13285 461 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 KRT40Q6A162 431 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 PPP4R3AQ6IN85 833 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 CKAP2LQ8IYA6 745 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 DBF4BQ8NFT6 615 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 BBXQ8WY36 941 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-231ENST00000641939 GJA10Q969M2 543 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 ZBTB10Q96DT7 871 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-231ENST00000641939 NAP1L4Q99733 375 aaKnown RBP16.98■□□□□ 0.31
PHGDH-231ENST00000641939 NKX2-4Q9H2Z4 354 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 UNC45AQ9H3U1 944 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 DISC1Q9NRI5 854 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 YBX2Q9Y2T7 364 aaKnown RBP16.98■□□□□ 0.31
PHGDH-231ENST00000641939 COL1A2P08123 1366 aa16.98■□□□□ 0.31
PHGDH-231ENST00000641939 IGSF9BQ9UPX0 1349 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 CHMP2AO43633 222 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 SLC37A4O43826 429 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 CHRNA1P02708 482 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 MGAT3Q09327 533 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 EARS2Q5JPH6 523 aaKnown RBP16.97■□□□□ 0.31
PHGDH-231ENST00000641939 ZNF484Q5JVG2 852 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 MTHFD1LQ6UB35 978 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 HERC6Q8IVU3 1022 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 RDM1Q8NG50 284 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 SEPT8Q92599 483 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 TNFRSF25Q93038 417 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 OSBPL7Q9BZF2 842 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 FAM49AQ9H0Q0 323 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-231ENST00000641939 SLC28A3Q9HAS3 691 aa16.97■□□□□ 0.31
PHGDH-231ENST00000641939 CHD7Q9P2D1 2997 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 SMIM35A0A1B0GVV1 85 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 KIF28PB7ZC32 967 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 CCNT1O60563 726 aaKnown RBP16.96■□□□□ 0.31
PHGDH-231ENST00000641939 MYOGP15173 224 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 DEFB103AP81534 67 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 MRPS6P82932 125 aaKnown RBP16.96■□□□□ 0.31
PHGDH-231ENST00000641939 GRIN2CQ14957 1233 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 MIER3Q7Z3K6 550 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.31
PHGDH-231ENST00000641939 FAM167AQ96KS9 214 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 FAM20AQ96MK3 541 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 KCNMB3Q9NPA1 279 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 CDY2AQ9Y6F7 541 aa16.96■□□□□ 0.31
PHGDH-231ENST00000641939 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 ST18O60284 1047 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 KLRC1P26715 233 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 HMGN5P82970 282 aaKnown RBP16.95■□□□□ 0.3
PHGDH-231ENST00000641939 IER5Q5VY09 327 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 B3GNT9Q6UX72 402 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 TRMT1LQ7Z2T5 733 aaKnown RBP16.95■□□□□ 0.3
PHGDH-231ENST00000641939 NME8Q8N427 588 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 MYLIPQ8WY64 445 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 APBB2Q92870 758 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 IFIH1Q9BYX4 1025 aaKnown RBP16.95■□□□□ 0.3
PHGDH-231ENST00000641939 EYSQ5T1H1 3165 aa16.95■□□□□ 0.3
PHGDH-231ENST00000641939 M0QZ92 97 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 TBX3O15119 743 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 ZNF862O60290 1169 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 GHRP10912 638 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 PRKCEQ02156 737 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-231ENST00000641939 LPIN1Q14693 890 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 SAFBQ15424 915 aaKnown RBP eCLIP16.94■□□□□ 0.3
PHGDH-231ENST00000641939 FBXO47Q5MNV8 452 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 PPP2R2DQ66LE6 453 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 C8orf76Q96K31 380 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 ZBED2Q9BTP6 218 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 NRBP2Q9NSY0 501 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 CEP131Q9UPN4 1083 aa16.94■□□□□ 0.3
PHGDH-231ENST00000641939 TLL1O43897 1013 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms