RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	LXN	Q9BS40	222 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	MKNK1	Q9BUB5	465 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	UNC45A	Q9H3U1	944 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	AGO4	Q9HCK5	861 aa	Known RBP	9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	PXMP2	Q9NR77	195 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	HOMER2	Q9NSB8	354 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	TBC1D7	Q9P0N9	293 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	CEP72	Q9P209	647 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	FRMD4B	Q9Y2L6	1034 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	PCDHA2	Q9Y5H9	948 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501	PARP14	Q460N5	1801 aa		9.16	□□□□□ -0.94
PNKP-231	ENST00000640501		H0YCG3	227 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	AFP	P02771	609 aa	Known RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	CCDC172	P0C7W6	258 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	AR	P10275	920 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	MYCL	P12524	364 aa	Predicted RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	HNRNPH3	P31942	346 aa	Known RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PSMC2	P35998	433 aa	Known RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	SMTN	P53814	917 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	HMGCS2	P54868	508 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PSMC5	P62195	406 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PSMC6	P62333	389 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	UBXN2A	P68543	259 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	MAP3K9	P80192	1104 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	RAD51AP2	Q09MP3	1159 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PTPN21	Q16825	1174 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	SH3D19	Q5HYK7	790 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	ODR4	Q5SWX8	454 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	RAD9B	Q6WBX8	426 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	CATSPERG	Q6ZRH7	1159 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	EPM2AIP1	Q7L775	607 aa	Predicted RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	USP37	Q86T82	979 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	VPS36	Q86VN1	386 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	TRIM59	Q8IWR1	403 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	SYCP3	Q8IZU3	236 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	DNER	Q8NFT8	737 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	CYP2W1	Q8TAV3	490 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	UBXN4	Q92575	508 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	TBC1D5	Q92609	795 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	ZKSCAN4	Q969J2	545 aa	Predicted RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	VTI1A	Q96AJ9	217 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	HVCN1	Q96D96	273 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PDCD2L	Q9BRP1	358 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	TTYH3	Q9C0H2	523 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PDCL3	Q9H2J4	239 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	KCTD10	Q9H3F6	313 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	LZTFL1	Q9NQ48	299 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	ANKEF1	Q9NU02	776 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	RGL1	Q9NZL6	768 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	MYO6	Q9UM54	1294 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	PLAGL2	Q9UPG8	496 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	EXOC7	Q9UPT5	735 aa		9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	BZW2	Q9Y6E2	419 aa	Known RBP	9.15	□□□□□ -0.94
PNKP-231	ENST00000640501	NPHP3-ACAD11	A0A0J9YXS1	232 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	SSU72P8	A0A1W2PR75	194 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	TESPA1	A2RU30	521 aa	Predicted RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	GTPBP10	A4D1E9	387 aa	Known RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	EFCAB8	A8MWE9	144 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	POTEB2	H3BUK9	544 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	EML1	O00423	815 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	AKR1B10	O60218	316 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	EGFR	P00533	1210 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	NR3C1	P04150	777 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	TUBB	P07437	444 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	PSAP	P07602	524 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ITGB5	P18084	799 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	EIF2AK2	P19525	551 aa	Known RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ANXA13	P27216	316 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ZNF131	P52739	623 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	PPP2R5A	Q15172	486 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	C10orf76	Q5T2E6	689 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	SFMBT2	Q5VUG0	894 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	IQCE	Q6IPM2	695 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	TRIM65	Q6PJ69	517 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	PADI6	Q6TGC4	694 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	B3GNT9	Q6UX72	402 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	C1orf186	Q6ZWK4	172 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	C4orf19	Q8IY42	314 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	PROCA1	Q8NCQ7	364 aa	Predicted RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	PIGO	Q8TEQ8	1089 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ZC3H15	Q8WU90	426 aa	Known RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ATG4C	Q96DT6	458 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ALS2CR12	Q96Q35	445 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	NAPG	Q99747	312 aa	Predicted RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	SENP7	Q9BQF6	1050 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	DESI2	Q9BSY9	194 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	GBP3	Q9H0R5	595 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	C17orf75	Q9HAS0	396 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	FAM207A	Q9NSI2	230 aa	Predicted RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	ADAMTS5	Q9UNA0	930 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	AFG3L2	Q9Y4W6	797 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	PCDHA10	Q9Y5I2	948 aa		9.14	□□□□□ -0.95
PNKP-231	ENST00000640501	MYH11	P35749	1972 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	SBF1	O95248	1867 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	NFASC	O94856	1347 aa		9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	DDX39A	O00148	427 aa	Known RBP	9.13	□□□□□ -0.95
PNKP-231	ENST00000640501	N4BP1	O75113	896 aa	Known RBP	9.13	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms