RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 FERMT3Q86UX7 667 aa6.21□□□□□ -1.41
RTTN-218ENST00000640408 C17orf53Q8N3J3 647 aaPredicted RBP6.21□□□□□ -1.41
RTTN-218ENST00000640408 SRBD1Q8N5C6 995 aaKnown RBP6.21□□□□□ -1.41
RTTN-218ENST00000640408 IQUBQ8NA54 791 aa6.21□□□□□ -1.41
RTTN-218ENST00000640408 EIF3CQ99613 913 aaKnown RBP6.21□□□□□ -1.41
RTTN-218ENST00000640408 GOLGA6BA6NDN3 693 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 PLEKHA8P1O95397 391 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 OR52Z1P0C646 297 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 CLEC10AQ8IUN9 316 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 KRI1Q8N9T8 703 aaKnown RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 KIF2CQ99661 725 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 CARD6Q9BX69 1037 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 MAGEF1Q9HAY2 307 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 JADE2Q9NQC1 790 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 LRWD1Q9UFC0 647 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 FER1L6Q2WGJ9 1857 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 WDR64B1ANS9 1081 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 SPTLC2O15270 562 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 TBCAO75347 108 aaKnown RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 PSAPP07602 524 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 MYSM1Q5VVJ2 828 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 SDCCAG8Q86SQ7 713 aaPredicted RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 USP37Q86T82 979 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 PDCD7Q8N8D1 485 aaKnown RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 CAPS2Q9BXY5 557 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.21□□□□□ -1.42
RTTN-218ENST00000640408 PUF60Q9UHX1 559 aaKnown RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 PPME1Q9Y570 386 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 COL11A2P13942 1736 aaPredicted RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 PIK3CDO00329 1044 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 F13A1P00488 732 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 GRK4P32298 578 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 CPT1AP50416 773 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 UBASH3AP57075 661 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 MUM1Q2TAK8 710 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 INTS8Q75QN2 995 aaKnown RBP6.21□□□□□ -1.42
RTTN-218ENST00000640408 KIAA1524Q8TCG1 905 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 CUEDC2Q9H467 287 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 GDPD2Q9HCC8 539 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 MAD2L2Q9UI95 211 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 CNTNAP5Q8WYK1 1306 aa6.21□□□□□ -1.42
RTTN-218ENST00000640408 CUTAO60888 179 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 HIP1RO75146 1068 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 SUPT20HL2P0C7V6 817 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 CYP2C8P10632 490 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 SCP2P22307 547 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 GNGT1P63211 74 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 FBXO46Q6PJ61 603 aaPredicted RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 SLC51AQ86UW1 340 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 CTNNBL1Q8WYA6 563 aaPredicted RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 SEPT1Q8WYJ6 367 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 INO80BQ9C086 356 aaPredicted RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 FGFR1OPO95684 399 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 MTMR1Q13613 665 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 ANO1Q5XXA6 986 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 CDAN1Q8IWY9 1227 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 STAG2Q8N3U4 1231 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 PXYLP1Q8TE99 480 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 GPKOWQ92917 476 aaPredicted RBP eCLIP6.2□□□□□ -1.42
RTTN-218ENST00000640408 CTAGE1Q96RT6 745 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 TINF2Q9BSI4 451 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 ZNF577Q9BSK1 485 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 BATF3Q9NR55 127 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 DDX25Q9UHL0 483 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 PAIP2BQ9ULR5 123 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 FAF1Q9UNN5 650 aaPredicted RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 MYH2Q9UKX2 1941 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 TXNP10599 105 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 CRHR2Q13324 411 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 PRR16Q569H4 304 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 HSP90AA5PQ58FG0 334 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 GPR142Q7Z601 462 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 CNNM3Q8NE01 707 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 TBCKQ8TEA7 893 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 SMC6Q96SB8 1091 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 SENP7Q9BQF6 1050 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 LARP6Q9BRS8 491 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 CFHR5Q9BXR6 569 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 PRM3Q9NNZ6 103 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 RMND1Q9NWS8 449 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 DNM3Q9UQ16 869 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 ARHGEF35A5YM69 484 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 BTBD18B2RXH4 712 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 CCNT1O60563 726 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 TRIM21P19474 475 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 MUTP22033 750 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 ADORA2AP29274 412 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 LONP1P36776 959 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 ISM2Q6H9L7 571 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 SELENOSQ9BQE4 189 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 PDCD2LQ9BRP1 358 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 IQCGQ9H095 443 aaKnown RBP6.2□□□□□ -1.42
RTTN-218ENST00000640408 PAPPA2Q9BXP8 1791 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 RRN3P2A6NIE6 340 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 MAGEB2O15479 319 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 BCRP11274 1271 aa6.2□□□□□ -1.42
RTTN-218ENST00000640408 CYP2C19P33261 490 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms